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Summary[edit source | edit]

  • pan ID?: SAUPAN006070000
  • symbol?:
  • description?: hypothetical protein
  • strand?: -
  • coordinates?: 6114887..6121130
  • synteny block?: BlockID0048110
  • occurrence?: in 66% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2420
    08BA02176:
    C248_2541
    11819-97:
    71193:
    ST398NM01_2540
    ECT-R 2:
    ECTR2_2340
    ED133:
    SAOV_2530c
    ED98:
    SAAV_2549
    HO 5096 0412:
    JH1:
    SaurJH1_2562
    JH9:
    SaurJH9_2510
    JKD6008:
    JKD6159:
    SAA6159_02379
    LGA251:
    M013:
    M013TW_2444
    MRSA252:
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_2467
    Mu50:
    SAV2483
    MW2:
    RF122:
    SAB2366c
    ST398:
    SAPIG2540
    T0131:
    TCH60:
    TW20:
    USA300_TCH1516:
    USA300HOU_2475
    VC40:
    SAVC_11290

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MFTTYKNINELENAYDEERKQLNDAFNQIDELRHQTRKKCEQMYDHFLYLKHKMNYSEDA
    N315            MFTTYKNINELENAYDEERKQLNDAFNQIDELRHQTRKKCEQMYDHFLYLKHKMNYSEDA
    NCTC8325        MFTTYKNINELENAYDEERKQLNDAFNQIDELRHQTRKKCEQMYDHFLYLKHKMNYSEDA
    Newman          MFTTYKNINELENAYDEERKQLNDAFNQIDELRHQTRKKCEQMYDHFLYLKHKMNYSEDA
    USA300_FPR3757  MFTTYKNINELENAYDEERKQLNDAFNQIDELRHQTRKKCEQMYDHFLYLKHKMNYSEDA
                    ************************************************************

    COL             MIRMTRIIESFDRETNQRIRHHEMKLEDYKDELRREYLKQSDRIEGDE
    N315            MIRMTRIIESFDRETNQRIRHHEMKLEDYKDELRREYLKQSDRIEGDE
    NCTC8325        MIRMTRIIESFDRETNQRIRHHEMKLEDYKDELRREYLKQSDRIEGDE
    Newman          MIRMTRIIESFDRETNQRIRHHEMKLEDYKDELRREYLKQSDRIEGDE
    USA300_FPR3757  MIRMTRIIESFDRETNQRIRHHEMKLEDYKDELRREYLKQSDRIEGDE
                    ************************************************