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Summary[edit source | edit]

  • pan ID?: SAUPAN006364000
  • symbol?: arcA
  • description?: arginine deiminase
  • strand?: -
  • coordinates?: 6398954..6400189
  • synteny block?: BlockID0050730
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2657 (arcA)
    N315:
    SA2428 (arcA)
    NCTC8325:
    Newman:
    NWMN_2534 (arcA)
    USA300_FPR3757:
    04-02981:
    SA2981_2574 (arcA)
    08BA02176:
    C248_2703 (arcA)
    11819-97:
    MS7_2640 (arcA)
    71193:
    ST398NM01_2685
    ECT-R 2:
    ECTR2_2489 (arcA)
    ED133:
    SAOV_2684c
    ED98:
    SAAV_2704 (arcA)
    HO 5096 0412:
    SAEMRSA15_25400 (arcA)
    JH1:
    SaurJH1_2715
    JH9:
    SaurJH9_2659
    JKD6008:
    SAA6008_02694 (arcA)
    JKD6159:
    SAA6159_02531 (arcA)
    LGA251:
    SARLGA251_24070 (arcA)
    M013:
    M013TW_2616
    MRSA252:
    SAR2714 (arcA)
    MSHR1132:
    SAMSHR1132_24590
    MSSA476:
    SAS2521
    Mu3:
    SAHV_2619 (arcA)
    Mu50:
    SAV2635 (arcA)
    MW2:
    MW2556 (arcA)
    RF122:
    SAB2510c (arcA)
    ST398:
    SAPIG2685 (arcA)
    T0131:
    SAT0131_02901
    TCH60:
    HMPREF0772_10553 (arcA)
    TW20:
    SATW20_27730 (arcA)
    USA300_TCH1516:
    USA300HOU_2635 (arcA3)
    VC40:
    SAVC_12055

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
    N315            MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
    NCTC8325        MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
    Newman          MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
    USA300_FPR3757  MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
                    ************************************************************

    COL             REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKALFATLSNQELVD
    N315            REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKTLFATLSNQELVD
    NCTC8325        REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKALFATLSNQELVD
    Newman          REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKALFATLSNQELVD
    USA300_FPR3757  REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKALFATLSNQELVD
                    ***********************************************:************

    COL             KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
    N315            KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
    NCTC8325        KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
    Newman          KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
    USA300_FPR3757  KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
                    ************************************************************

    COL             RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
    N315            RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
    NCTC8325        RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
    Newman          RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
    USA300_FPR3757  RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
                    ************************************************************

    COL             EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
    N315            EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
    NCTC8325        EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
    Newman          EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
    USA300_FPR3757  EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
                    ************************************************************

    COL             IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
    N315            IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
    NCTC8325        IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
    Newman          IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
    USA300_FPR3757  IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
                    ************************************************************

    COL             PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
    N315            PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
    NCTC8325        PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
    Newman          PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
    USA300_FPR3757  PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
                    ***************************************************