NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus USA300_FPR3757
• locus tag: SAUSA300_RS02790 [old locus tag: SAUSA300_0521 ]
• pan locus tag^?: SAUPAN002305000
• symbol: SAUSA300_RS02790
• pan gene symbol^?: nusG
• synonym:
• product: transcription termination/antitermination protein NusG

⊟Gene

⊟General

• type: CDS
• locus tag: SAUSA300_RS02790 [old locus tag: SAUSA300_0521 ]
• symbol: SAUSA300_RS02790
• product: transcription termination/antitermination protein NusG
• replicon: chromosome
• strand: +
• coordinates: 581322..581870
• length: 549
• essential: unknown

⊟Accession numbers

• Location: NC_007793 (581322..581870) NCBI
• MicrobesOnline:

⊟Phenotype

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⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  
  ATGTCTGAAGAAGTTGGCGCAAAGCGTTGGTATGCAGTGCATACATATTCTGGATATGAA
  AATAAAGTTAAAAAGAATTTAGAAAAAAGAGTAGAATCTATGAATATGACTGAACAAATC
  TTTAGAGTAGTCATACCGGAAGAAGAAGAAACTCAAGTAAAAGATGGCAAAGCTAAAACG
  ACTGTTAAAAAAACATTCCCTGGATATGTTTTAGTGGAATTAATCATGACAGATGAATCA
  TGGTATGTGGTAAGAAATACACCAGGCGTTACTGGTTTTGTAGGTTCTGCAGGTGCAGGG
  TCTAAGCCAAATCCATTGTTACCAGAAGAAGTTCGCTTCATCTTAAAACAAATGGGTCTT
  AAAGAAAAGACTATCGATGTTGAACTCGAAGTTGGCGAGCAAGTTCGTATTAAATCAGGT
  CCATTTGCGAATCAAGTTGGTGAAGTTCAAGAAATTGAAACAGATAAGTTTAAGCTAACA
  GTATTAGTAGATATGTTTGGCCGAGAAACACCAGTAGAAGTTGAATTCGATCAAATAGAA
  AAGCTTTAA
  60
  120
  180
  240
  300
  360
  420
  480
  540
  549
  

⊟Protein

⊟General

• locus tag: SAUSA300_RS02790 [old locus tag: SAUSA300_0521 ]
• symbol: SAUSA300_RS02790
• description: transcription termination/antitermination protein NusG
• length: 182
• theoretical pI: 4.78638
• theoretical MW: 20663.5
• GRAVY: -0.423626

⊟Function

• reaction:
• TIGRFAM:
  Genetic information processingTranscriptionTranscription factorstranscription termination/antitermination factor NusG (TIGR00922; HMM-score: 203.6)
  NusG family protein (TIGR01956; HMM-score: 106.4)
  Genetic information processingTranscriptionTranscription factorstranscription elongation factor/antiterminator RfaH (TIGR01955; HMM-score: 61.1)
  transcription elongation factor Spt5 (TIGR00405; HMM-score: 27)
• TheSEED:
• PFAM:
  NusG-like (CL0439) NusG; Transcription termination factor nusG (PF02357; HMM-score: 96.1)
  KOW (CL0107) KOW; KOW motif (PF00467; HMM-score: 29)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: Cytoplasmic
  • Cytoplasmic Score: 7.5
  • Cytoplasmic Membrane Score: 1.15
  • Cellwall Score: 0.62
  • Extracellular Score: 0.73
  • Internal Helices: 0
• LocateP:
• SignalP: no predicted signal peptide
  • Ymax: 0.133
  • Ymax_pos: 59
  • Cmax: 0.127
  • Cmax_pos: 59
  • Smax: 0.178
  • Smax_pos: 53
  • Smean: 0.094
  • D: 0.118
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 447211046 NCBI
• RefSeq: WP_001288302 NCBI
• UniProt:

⊟Protein sequence

• MSEEVGAKRWYAVHTYSGYENKVKKNLEKRVESMNMTEQIFRVVIPEEEETQVKDGKAKTTVKKTFPGYVLVELIMTDESWYVVRNTPGVTGFVGSAGAGSKPNPLLPEEVRFILKQMGLKEKTIDVELEVGEQVRIKSGPFANQVGEVQEIETDKFKLTVLVDMFGRETPVEVEFDQIEKL

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• SAUSA300_RS02790 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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