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NCBI: 02-MAR-2017

⊟Summary[edit source | edit]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_RS04155 [old locus tag: SAUSA300_0770 ]
  • pan locus tag?: SAUPAN002777000
  • symbol: SAUSA300_RS04155
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit source | edit]

⊟Gene[edit source | edit]

⊟General[edit source | edit]

  • type: CDS
  • locus tag: SAUSA300_RS04155 [old locus tag: SAUSA300_0770 ]
  • symbol: SAUSA300_RS04155
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 857695..858138
  • length: 444
  • essential: unknown

⊟Accession numbers[edit source | edit]

  • Location: NC_007793 (857695..858138) NCBI
  • MicrobesOnline:

⊟Phenotype[edit source | edit]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGATTAACATTATTTCAGCTATAGGATCTATTGGAACATTTATTATGGCTTTATTTTAT
    TTTGTATCAGTTTCAGTTCAACTTTATCAAATGAAAATTAGCTTTCTGCCAGCTTTAGGT
    TTTAACCAAATTTTATTAGAAAGGGAGGAGGATCAACTTAATATAATGAATTCGGCAACA
    GAAGAGCATCATCATAAAGATTATATTAAACTATATAATTTAGGTGGCGGTGCTGCTAAA
    AAAATTGCAATAGAGGTTTTATTGGGGAAGGATAAAGTCATTCAGAAAAAATACGTGCAT
    ATTTTACCTAGTAAAGAAGGGTACATGTTACCAATTAATAAAAATGTGTACGAAGAATTA
    GAAAGAACGATTGAGAACAATGGTCATGAAGCTGATTTGAATGTACGTATGACTTATTAT
    CATAATGTAAGTCGCAAACAATAG
    60
    120
    180
    240
    300
    360
    420
    444

⊟Protein[edit source | edit]

⊟General[edit source | edit]

  • locus tag: SAUSA300_RS04155 [old locus tag: SAUSA300_0770 ]
  • symbol: SAUSA300_RS04155
  • description: hypothetical protein
  • length: 147
  • theoretical pI: 7.8941
  • theoretical MW: 16903.5
  • GRAVY: -0.15102

⊟Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:
  • PFAM:
    E-set (CL0159) CARDB; CARDB (PF07705; HMM-score: 16.4)

⊟Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

⊟Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helix: 1
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.145
    • Ymax_pos: 18
    • Cmax: 0.157
    • Cmax_pos: 18
    • Smax: 0.267
    • Smax_pos: 36
    • Smean: 0.145
    • D: 0.145
  • predicted transmembrane helices (TMHMM): 1

⊟Accession numbers[edit source | edit]

  • GI: 446530832 NCBI
  • RefSeq: WP_000608178 NCBI
  • UniProt:

⊟Protein sequence[edit source | edit]

  • MINIISAIGSIGTFIMALFYFVSVSVQLYQMKISFLPALGFNQILLEREEDQLNIMNSATEEHHHKDYIKLYNLGGGAAKKIAIEVLLGKDKVIQKKYVHILPSKEGYMLPINKNVYEELERTIENNGHEADLNVRMTYYHNVSRKQ

⊟Experimental data[edit source | edit]

  • experimentally validated: no data available

⊟Expression & Regulation[edit source | edit]

⊟Operon[edit source | edit]

  • SAUSA300_RS04155 no polycistronic organisation predicted

⊟Regulation[edit source | edit]

  • sigma factor:
  • regulator:

⊟Transcription pattern[edit source | edit]

⊟Protein synthesis (provided by Aureolib)[edit source | edit]

⊟Protein stability[edit source | edit]

  • half-life: no data available

⊟Biological Material[edit source | edit]

⊟Mutants[edit source | edit]

⊟Expression vector[edit source | edit]

⊟lacZ fusion[edit source | edit]

⊟GFP fusion[edit source | edit]

⊟two-hybrid system[edit source | edit]

⊟FLAG-tag construct[edit source | edit]

⊟Antibody[edit source | edit]

⊟Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

⊟Literature[edit source | edit]

⊟References[edit source | edit]

⊟Relevant publications[edit source | edit]

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