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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_RS14865 [old locus tag: SAUSA300_pUSA030026 ]
  • pan locus tag?:
  • symbol: SAUSA300_RS14865
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SAUSA300_RS14865 [old locus tag: SAUSA300_pUSA030026 ]
  • symbol: SAUSA300_RS14865
  • product: hypothetical protein
  • replicon: pUSA03
  • strand: +
  • coordinates: 24786..26057
  • length: 1272
  • essential: unknown

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGATTACACAAATCAAAAAAGAAAATACATAATATTTGGTATTGTTCTTGCTATAACA
    CTTCTAATTGTTGGAATTGCTTACTATTTAATCAGTTTGAATAATGCTAAAGGACAAGTT
    AAAGAATTTGAAAAATTAGTACAGCATAATGACTACAATAGTATTGCTAAAAAGTTATCT
    AATAAAGAAGAAACTTTATCTGAAAATGATGCTAAAAACTTTGTGTTATTTGTTAAAAGT
    AAAGAAAATCAAGAACAATACAATGAGCAAATACAAAAAATTAAAAGTAATATTGATAAA
    AATAAAGACAATAATACCGTGTATGGCTCTATAACAGATCAATACGGAAATAACCTAATA
    ACTATTAAGAAAAACGGAAAGACTTTCTTTTTTATAGATAAATTAGAATTCAAACCTAAA
    CTTACCAGCGTTTATGTGAAAGAATTTAATAACACTGGAATTTACAAATATCAGCAAGAA
    AATGCTAAAAAGGTAATAGCAGAAAGCAATCAAACAACAGAATTAGGCAAGTTCTTTATT
    GGTAAATATAGTATTAAAACAGATAAAACAATTGAAGATTCAATTCACAATGGGACTTTG
    ACAGGAAAAATAGATATAGATTTAAGCAATAGAGGAAACAATAATAAGATATATGCAGAT
    GAAGATTTTAACCAAAGCTGGTTTAAGGTTAAGCTAAACAATGATAGTTTATTAGAAAAA
    AATAGTTACAAACTTTTAATTGATGATAAAGATGTTGATTATAATTCCAAAAAGACATAT
    GGAAAGTATTACAATCCAACTGAATTAAGTGTATATGCGATTGGAAAATTAGAGGGTAAA
    GAGTTTAAAACTAACAGAATAAATATAAGACGTAATTATGATAATAAACCTCAAAATTTA
    AAATTAAGTTTTAAGGAATCTCAAATAAGAGATTATGAGAGTAAAAGTAAAAAGGTTAAA
    GAAAAAGCTAAAAGCTATATTAAAGAATATACGAAAGAGTTAAACAAAGCATATAAAAAG
    AAAGATTATAAATATATATCTGACTACGTTAAAAATAACTCTCAATTAGAAAAACAACTA
    AAAAAACAGGTTAAGTCTAAATCAAAAGTTAAATTTAAAGATGTTAAGATAAACAACGTT
    AAACGTGATAAAAACAAAATATATATTGAGTTAAGTAAAACCAACAATGGTAATGTGTTT
    CAAACGAAATATACCTTAGATTACGATAATGTATCAAATGAATTTCTAGTAGAAGATTCA
    CATGATAATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1272

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SAUSA300_RS14865 [old locus tag: SAUSA300_pUSA030026 ]
  • symbol: SAUSA300_RS14865
  • description: hypothetical protein
  • length: 423
  • theoretical pI: 9.99319
  • theoretical MW: 49634.8
  • GRAVY: -0.979905

Function[edit | edit source]

  • TIGRFAM:
    heavy metal sensor kinase (TIGR01386; EC 2.7.13.3; HMM-score: 8.8)
  • TheSEED: see SAUSA300_pUSA030026
  • PFAM:
    no clan defined AI-2E_transport; AI-2E family transporter (PF01594; HMM-score: 15.2)
    IncA; IncA protein (PF04156; HMM-score: 15.1)
    and 2 more
    HSCB_C; HSCB C-terminal oligomerisation domain (PF07743; HMM-score: 9.1)
    CENP-H; Centromere protein H (CENP-H) (PF05837; HMM-score: 6.7)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 9.87
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helix: 1
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.187122
    • TAT(Tat/SPI): 0.001246
    • LIPO(Sec/SPII): 0.008182
  • predicted transmembrane helices (TMHMM): 1

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MDYTNQKRKYIIFGIVLAITLLIVGIAYYLISLNNAKGQVKEFEKLVQHNDYNSIAKKLSNKEETLSENDAKNFVLFVKSKENQEQYNEQIQKIKSNIDKNKDNNTVYGSITDQYGNNLITIKKNGKTFFFIDKLEFKPKLTSVYVKEFNNTGIYKYQQENAKKVIAESNQTTELGKFFIGKYSIKTDKTIEDSIHNGTLTGKIDIDLSNRGNNNKIYADEDFNQSWFKVKLNNDSLLEKNSYKLLIDDKDVDYNSKKTYGKYYNPTELSVYAIGKLEGKEFKTNRINIRRNYDNKPQNLKLSFKESQIRDYESKSKKVKEKAKSYIKEYTKELNKAYKKKDYKYISDYVKNNSQLEKQLKKQVKSKSKVKFKDVKINNVKRDKNKIYIELSKTNNGNVFQTKYTLDYDNVSNEFLVEDSHDN

Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]