NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA_RS00705 [old locus tag: SA0110 ]
• pan locus tag^?: SAUPAN000912000
• symbol: SA_RS00705
• pan gene symbol^?: sirB
• synonym:
• product: iron ABC transporter permease

⊟Gene

⊟General

• type: CDS
• locus tag: SA_RS00705 [old locus tag: SA0110 ]
• symbol: SA_RS00705
• product: iron ABC transporter permease
• replicon: chromosome
• strand: -
• coordinates: 126538..127533
• length: 996
• essential: unknown

⊟Accession numbers

• Location: NC_002745 (126538..127533) NCBI
• MicrobesOnline:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  601
  661
  721
  781
  841
  901
  961
  
  ATGCTACTTAAACCAAAATACCAAATCGTTATTGCTGGTTTATGTCTTGCAATAGTAGCT
  ATCTTAAGTTTAATGATTGGAAATACGCTTGTGTCACCAGGTACGGTGATACAGGCGTTA
  TTCAACTTTGATAGTGAAAACGATTTACATGATGTTGTCACTGGTGCACGGGCGTCGAGA
  ACAATCATTGCGTTATTGACTGGTGCTGCCCTTGCTGTCTCAGGTTTGTTGATGCAAGCA
  CTTACACGAAACCCAATAGCCTCACCAGGGCTTTTCGGTGTCAATGCAGGCGCAGTATTT
  TTTGTCATTTTTAGTATTACATTTATCCAAATTCAATCTTTTAAAATGATTGTAGTTATT
  GCATTTTTAGGTGCCATTGTTGTTACTATATTAGTTGTTGCGCTAGGTATGTTTAGACAA
  ACACTATTCTCACCTCACCGTGTCATTTTGGCAGGTGCTGCGATTGCGATGCTATTTACA
  GCCTTTACTCAAGGCATACTTATTATGAACGAAACAGACTTACAAGGCCTATTATTTTGG
  TTAAGTGGCTCCGTTTCATTACGTAATATTTGGGATATCCCATGGATTATTCCGCTTGTA
  TTGATACTTATTTTAATTGCATTTAGCATGGCTGCACACATCAACATCTTGATGACAAGT
  GACGACATTGCAACCGGCCTCGGTCAAAACATAAAATTAATCAAATGGATGATTATTATG
  CTCATCAGTATGTTAGCCGGTATTTCGGTAGCCGTAGCTGGATCAATCGTCTTTGTGGGT
  CTTATCGTACCGAATATTAGCAAACGATTATTACCACCAAACTATAAGTATTTAATTCCT
  TTTACTGCATTAGCTGGAGCAATCCTAATGATCATTTCAGACATTGTTGCTCGTATAATA
  ATTAAGCCACTAGAGTTGCCTATCGGTGTCGTTACCGCTGTCATTGGCGCTATTGTCTTA
  ATCTATATTATGAAGAAAGGACGTCAACGCTTATGA
  60
  120
  180
  240
  300
  360
  420
  480
  540
  600
  660
  720
  780
  840
  900
  960
  996
  

⊟Protein

⊟General

• locus tag: SA_RS00705 [old locus tag: SA0110 ]
• symbol: SA_RS00705
• description: iron ABC transporter permease
• length: 331
• theoretical pI: 10.5981
• theoretical MW: 35539.2
• GRAVY: 1.23082

⊟Function

• reaction:
• TIGRFAM:
  proposed F420-0 ABC transporter, permease protein (TIGR03869; HMM-score: 154.2)
• TheSEED:
• PFAM:
  Membrane_trans (CL0142) FecCD; FecCD transport family (PF01032; HMM-score: 298.3)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: Cytoplasmic Membrane
  • Cytoplasmic Score: 0
  • Cytoplasmic Membrane Score: 10
  • Cellwall Score: 0
  • Extracellular Score: 0
  • Internal Helices: 9
• LocateP:
• SignalP: no predicted signal peptide
  • Ymax: 0.384
  • Ymax_pos: 40
  • Cmax: 0.294
  • Cmax_pos: 40
  • Smax: 0.67
  • Smax_pos: 31
  • Smean: 0.416
  • D: 0.397
• predicted transmembrane helices (TMHMM): 9

⊟Accession numbers

• GI: 446847734 NCBI
• RefSeq: WP_000924990 NCBI
• UniProt:

⊟Protein sequence

• MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVIAFLGAIVVTILVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNETDLQGLLFWLSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• SA_RS00705 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

You are kindly invited to share additional interesting facts.