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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS01210 [old locus tag: SA0205 ]
  • pan locus tag?: SAUPAN001063000
  • symbol: SA_RS01210
  • pan gene symbol?:
  • synonym:
  • product: peptidase M23

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA_RS01210 [old locus tag: SA0205 ]
  • symbol: SA_RS01210
  • product: peptidase M23
  • replicon: chromosome
  • strand: +
  • coordinates: 243487..244065
  • length: 579
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002745 (243487..244065) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGACAAAGCGACCAAAACGTATTTTGGCAACAATTATCATTTTTCTTTCACTATTATTT
    ACGATTATTTATATAGATGACATTCAAAAATGGTTTAACCAATATACCGATAAATTGACA
    CAAAATCATAAAGGACAAGGACACTCAAAATGGGAAGACTTTTTTAGAGGGAGTAGGATT
    ACTGAGACTTTTGGCAAATATCAACATTCACCATTTGATGGTAAGCATTATGGCATTGAT
    TTTGCATTGCCAAAAGGTACACCAATTAAAGCGCCGACGAATGGTAAAGTAACACGTATC
    TTTAATAATGAATTAGGCGGCAAGGTATTACAGATTGCCGAAGACAATGGAGAATATCAC
    CAGTGGTATCTACACTTAGACAAATATAATGTCAAAGTAGGTGATCGAGTTAAAGCAGGT
    GATATTATTGCATATTCAGGCAATACAGGTAAACAAACGACAGGCGCACATTTACATTTT
    CAAAGAATGAAGGGTGGCGTAGGTAATGCATATGCAGAAGATCCTAAACCGTTTATCGAG
    CAGTTACCTGATGGGGAACGTAGCCTATATGATTTGTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    579

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA_RS01210 [old locus tag: SA0205 ]
  • symbol: SA_RS01210
  • description: peptidase M23
  • length: 192
  • theoretical pI: 9.68612
  • theoretical MW: 21964.7
  • GRAVY: -0.630208

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    ABC exporter membrane fusion protein, DevB family (TIGR02971; HMM-score: 10.2)
    Genetic information processingTranscriptionDNA-dependent RNA polymeraseDNA-directed RNA polymerase, beta' subunit (TIGR02386; EC 2.7.7.6; HMM-score: 9)
  • TheSEED:
  • PFAM:
    Hybrid (CL0105) Peptidase_M23; Peptidase family M23 (PF01551; HMM-score: 95.5)
    Biotin_lipoyl_2; Biotin-lipoyl like (PF13533; HMM-score: 25.4)
    Apocytochr_F_C; Apocytochrome F, C-terminal (PF01333; HMM-score: 16.4)
    Biotin_lipoyl; Biotin-requiring enzyme (PF00364; HMM-score: 15.9)
    no clan definedHPIH; N-terminal domain with HPIH motif (PF13323; HMM-score: 14.5)
    Hybrid (CL0105) RnfC_N; RnfC Barrel sandwich hybrid domain (PF13375; HMM-score: 14.5)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Extracellular
    • Cytoplasmic Score: 0.1
    • Cytoplasmic Membrane Score: 0.14
    • Cellwall Score: 0.15
    • Extracellular Score: 9.6
    • Internal Helix: 1
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.224
    • Ymax_pos: 11
    • Cmax: 0.127
    • Cmax_pos: 26
    • Smax: 0.647
    • Smax_pos: 2
    • Smean: 0.502
    • D: 0.332
  • predicted transmembrane helices (TMHMM): 1

Accession numbers[edit source | edit]

  • GI: 446089065 NCBI
  • RefSeq: WP_000166920 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MTKRPKRILATIIIFLSLLFTIIYIDDIQKWFNQYTDKLTQNHKGQGHSKWEDFFRGSRITETFGKYQHSPFDGKHYGIDFALPKGTPIKAPTNGKVTRIFNNELGGKVLQIAEDNGEYHQWYLHLDKYNVKVGDRVKAGDIIAYSGNTGKQTTGAHLHFQRMKGGVGNAYAEDPKPFIEQLPDGERSLYDL

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SA_RS01210 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]