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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS03425 [old locus tag: SA0596 ]
  • pan locus tag?: SAUPAN002517000
  • symbol: SA_RS03425
  • pan gene symbol?: tagX
  • synonym:
  • product: glycosyl transferase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA_RS03425 [old locus tag: SA0596 ]
  • symbol: SA_RS03425
  • product: glycosyl transferase
  • replicon: chromosome
  • strand: +
  • coordinates: 689049..690110
  • length: 1062
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002745 (689049..690110) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGAGGCTTACGATAATCATACCTACATGTAATAATGAGGCAACAATTCGACAATTGTTA
    ATATCTATTGAGAGTAAAGAACACTATAGAATCCTTTGTATTGATGGTGGTTCTACTGAT
    CAAACAATTCCTATGATTGAACGGTTACAAAGAGAACTCAAGCATATTTCATTAATACAA
    TTACAAAATGCTTCGATAGCTACGTGTATTAATAAAGGTTTGATGGATATCAAAATGACA
    GATCCACATGATAGTGACGCATTTATGGTCATAAATCCAACATCAATCGTATTGCCAGGT
    AAATTAGATAGGTTAACTGCAGCTTTCAAAAATAATGATAATATTGATATGGTAATAGGG
    CAGCGAGCTTACAATTACCATGGTGAATGGAAATTGAAAAGTGCTGATGAGTTTATTAAA
    GATAATCGAATCGTTACATTAACGGAACAACCAGATTTGTTATCAATGATGTCTTTTGAC
    GGAAAGTTATTCAGTGCTAAATTTGCTGAATTACAGTGTGACGAAACTTTAGCTAACACA
    TACAATCACGCAATACTTGTCAAGGCGATGCAAAAAGCTACGGATATACATTTAGTTTCA
    CAGATGATTGTCGGAGATAACGATATAGATACACATGCTACAAGTAACGATGAAGATTTT
    AATAGATATATCATAGAAATTATGAAAATAAGACAACGAGTCATGGAAATGTTACTATTA
    CCTGAACAAAGGCTATTATATAGTGATATGGTTGATCGTATTTTATTCAATAATTCATTA
    AAATATTATATGAATGAACACCCAGCAGTAACGCACACGACAATTCAACTCGTAAAAGAC
    TATATTATGTCTATGCAGCATTCTGATTATGTATCGCAAAACATGTTTGACATTATAAAT
    ACAGTTGAATTTATTGGTGAGAATTGGGATAGAGAAATATACGAATTGTGGCGACAAACA
    TTAATTCAAGTGGGCATTAATAGGCCGACTTATAAAAAATTCTTGATACAACTTAAAGGG
    AGAAAGTTTGCACATCGAACAAAATCAATGTTAAAACGATAA
    60
    120
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    240
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    360
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    660
    720
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    840
    900
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    1020
    1062

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA_RS03425 [old locus tag: SA0596 ]
  • symbol: SA_RS03425
  • description: glycosyl transferase
  • length: 353
  • theoretical pI: 6.74165
  • theoretical MW: 41102.3
  • GRAVY: -0.27932

Function[edit source | edit]

  • reaction:
    EC 2.4.-.-?  ExPASy
  • TIGRFAM:
    poly-beta-1,6 N-acetyl-D-glucosamine synthase (TIGR03937; EC 2.4.1.-; HMM-score: 28.7)
    Unknown functionEnzymes of unknown specificitytransferase 2, rSAM/selenodomain-associated (TIGR04283; EC 2.-.-.-; HMM-score: 28.6)
    glycosyltransferase, TIGR04182 family (TIGR04182; HMM-score: 26.9)
    mycofactocin system glycosyltransferase (TIGR03965; HMM-score: 16.2)
  • TheSEED:
  • PFAM:
    GT-A (CL0110) Glycos_transf_2; Glycosyl transferase family 2 (PF00535; HMM-score: 43.3)
    Glyco_tranf_2_3; Glycosyltransferase like family 2 (PF13641; HMM-score: 23.1)
    Glyco_tranf_2_2; Glycosyltransferase like family 2 (PF10111; HMM-score: 16.9)
    no clan definedThg1; tRNAHis guanylyltransferase (PF04446; HMM-score: 15.2)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.133
    • Ymax_pos: 15
    • Cmax: 0.116
    • Cmax_pos: 67
    • Smax: 0.201
    • Smax_pos: 11
    • Smean: 0.158
    • D: 0.143
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 447163926 NCBI
  • RefSeq: WP_001241182 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MRLTIIIPTCNNEATIRQLLISIESKEHYRILCIDGGSTDQTIPMIERLQRELKHISLIQLQNASIATCINKGLMDIKMTDPHDSDAFMVINPTSIVLPGKLDRLTAAFKNNDNIDMVIGQRAYNYHGEWKLKSADEFIKDNRIVTLTEQPDLLSMMSFDGKLFSAKFAELQCDETLANTYNHAILVKAMQKATDIHLVSQMIVGDNDIDTHATSNDEDFNRYIIEIMKIRQRVMEMLLLPEQRLLYSDMVDRILFNNSLKYYMNEHPAVTHTTIQLVKDYIMSMQHSDYVSQNMFDIINTVEFIGENWDREIYELWRQTLIQVGINRPTYKKFLIQLKGRKFAHRTKSMLKR

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SA_RS03425 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]