NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA_RS07770 [old locus tag: SA1373 ]
• pan locus tag^?: SAUPAN004122000
• symbol: SA_RS07770
• pan gene symbol^?: comGB
• synonym:
• product: competence protein ComGB

⊟Gene

⊟General

• type: CDS
• locus tag: SA_RS07770 [old locus tag: SA1373 ]
• symbol: SA_RS07770
• product: competence protein ComGB
• replicon: chromosome
• strand: -
• coordinates: 1579157..1580227
• length: 1071
• essential: unknown

⊟Accession numbers

• Location: NC_002745 (1579157..1580227) NCBI
• MicrobesOnline:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  601
  661
  721
  781
  841
  901
  961
  1021
  
  GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAG
  GCCCAACAAATCGATTTACTTTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTG
  TATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATAAAAATAAGCAATTAGGTACC
  ACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAAATATTATCACTGATAGGT
  TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATTATAGAC
  GTTCTAGAAGAAACCGTAAATTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTA
  AAGACACTGCAATACCCCTTAATACTAGTTTCTATCTTTATTGCTATGATTATTATATTA
  AACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
  TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATG
  CTCATAATAGTATCTATGTTGGCTATTATTATGAAATTAATTTATAACAATTTAAATATG
  CTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATATCAGGCTATTTCCAATTATTT
  AAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
  TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAA
  TACTTATTAACTTATTCAGAAATGGGATATGGTTTGCCTCAAATTTTAGAAAAACTAAAA
  TGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTGAAAAGAGAGGGAAGCTAGAA
  GTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
  CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATT
  TATTTAGTAATTATGTTACCAATGTTTCAAATGATGCAAAGTATAAAATAA
  60
  120
  180
  240
  300
  360
  420
  480
  540
  600
  660
  720
  780
  840
  900
  960
  1020
  1071
  

⊟Protein

⊟General

• locus tag: SA_RS07770 [old locus tag: SA1373 ]
• symbol: SA_RS07770
• description: competence protein ComGB
• length: 356
• theoretical pI: 10.0622
• theoretical MW: 41447.6
• GRAVY: 0.401124

⊟Function

• reaction:
• TIGRFAM:
  Genetic information processingProtein fateProtein and peptide secretion and traffickingtype II secretion system protein F (TIGR02120; HMM-score: 95.4)
• TheSEED:
• PFAM:
  no clan definedT2SSF; Type II secretion system (T2SS), protein F (PF00482; HMM-score: 81.2)
  E1-E2_ATPase; E1-E2 ATPase (PF00122; HMM-score: 9.3)
  DUF2207; Predicted membrane protein (DUF2207) (PF09972; HMM-score: 6.1)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: Cytoplasmic Membrane
  • Cytoplasmic Score: 0
  • Cytoplasmic Membrane Score: 10
  • Cellwall Score: 0
  • Extracellular Score: 0
  • Internal Helices: 3
• LocateP:
• SignalP: no predicted signal peptide
  • Ymax: 0.187
  • Ymax_pos: 13
  • Cmax: 0.13
  • Cmax_pos: 22
  • Smax: 0.441
  • Smax_pos: 4
  • Smean: 0.351
  • D: 0.251
• predicted transmembrane helices (TMHMM): 3

⊟Accession numbers

• GI: 446699076 NCBI
• RefSeq: WP_000776422 NCBI
• UniProt:

⊟Protein sequence

• MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIGYSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLSSFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQSIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIKQTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• SA_RS07770 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

You are kindly invited to share additional interesting facts.