NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS13280 [old locus tag: SA2317 ]
- pan locus tag?: SAUPAN006179000
- symbol: SA_RS13280
- pan gene symbol?: —
- synonym:
- product: N-acetyltransferase
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SA_RS13280 [old locus tag: SA2317 ]
- symbol: SA_RS13280
- product: N-acetyltransferase
- replicon: chromosome
- strand: +
- coordinates: 2601700..2602191
- length: 492
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_002745 (2601700..2602191) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
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481ATGATTCGATGTGCTAAAAAAGAAGATTTAAACGCTATATTAGCGATATACAACGATGCC
ATTATTAATACAACAGCTGTTTATACTTATAAACCGCAAACCATAGACGAACGTATCGCA
TGGTTTGAAACGAAACAACGTAATCATGAGCCTATCTTTGTATTTGAGGAAAATGGAAGT
GTATTAGGGTTTGCGACGTTCGGTTCGTTTAGACCTTGGCCAGCATATCAATATACTATC
GAGCATTCTATTTATGTCGATGCTTCAGCTAGAGGAAAAGGTATCGCTAGTCAATTATTA
CAGCGTTTAATTGTAGAGGCAAAAGCTAAAGGTTATCGTACACTTGTTGCTGGTATTGAT
GCTTCTAATGAAGCGAGTATTAAATTACATCAAAAATTCAATTTCAAGCATGCCGGCACA
CTGACCAATGTAGGCTATAAATTTGATTACTGGTTAGATTTAGCTTTTTATGAATTAGAT
TTAAAAGACTAG60
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⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SA_RS13280 [old locus tag: SA2317 ]
- symbol: SA_RS13280
- description: N-acetyltransferase
- length: 163
- theoretical pI: 7.65031
- theoretical MW: 18654.1
- GRAVY: -0.234969
⊟Function[edit source | edit]
- reaction:
- TIGRFAM: Protein synthesisRibosomal proteins: synthesis and modificationribosomal-protein-alanine acetyltransferase (TIGR01575; EC 2.3.1.128; HMM-score: 38)Cellular processesAdaptations to atypical conditionsdiaminobutyrate acetyltransferase (TIGR02406; EC 2.3.1.178; HMM-score: 30.7)UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase (TIGR03585; EC 2.3.1.202; HMM-score: 27.3)Biosynthesis of cofactors, prosthetic groups, and carriersGlutathione and analogsmycothiol synthase (TIGR03448; EC 2.3.1.189; HMM-score: 13.6)GNAT-family acetyltransferase TIGR03103 (TIGR03103; HMM-score: 10.4)
- TheSEED:
- PFAM: Acetyltrans (CL0257) Acetyltransf_4; Acetyltransferase (GNAT) domain (PF13420; HMM-score: 79.9)Acetyltransf_1; Acetyltransferase (GNAT) family (PF00583; HMM-score: 64.5)Acetyltransf_3; Acetyltransferase (GNAT) domain (PF13302; HMM-score: 51.9)Acetyltransf_7; Acetyltransferase (GNAT) domain (PF13508; HMM-score: 39.1)Acetyltransf_10; Acetyltransferase (GNAT) domain (PF13673; HMM-score: 37)FR47; FR47-like protein (PF08445; HMM-score: 26.4)Acetyltransf_CG; GCN5-related N-acetyl-transferase (PF14542; HMM-score: 24.2)GNAT_acetyltran; GNAT acetyltransferase (PF12746; HMM-score: 23.3)Acetyltransf_9; Acetyltransferase (GNAT) domain (PF13527; HMM-score: 17.3)Acetyltransf_8; Acetyltransferase (GNAT) domain (PF13523; HMM-score: 14.5)Acetyltransf_13; ESCO1/2 acetyl-transferase (PF13880; HMM-score: 14.4)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.115
- Ymax_pos: 11
- Cmax: 0.117
- Cmax_pos: 30
- Smax: 0.179
- Smax_pos: 1
- Smean: 0.124
- D: 0.119
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MIRCAKKEDLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRNHEPIFVFEENGSVLGFATFGSFRPWPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAGTLTNVGYKFDYWLDLAFYELDLKD
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SA_RS13280 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]