PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

FunGene: 08-OCT-2024

⊟Summary

• organism: Staphylococcus aureus JSNZ
• locus tag: JSNZ_000038
• pan locus tag^?: SAUPAN000851000
• symbol: JSNZ_000038
• pan gene symbol^?: —
• synonym:
• product: alpha/beta hydrolase

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: JSNZ_000038
• symbol: JSNZ_000038
• product: alpha/beta hydrolase
• replicon: chromosome
• strand: -
• coordinates: 44458..45372
• length: 915
• essential: unknown

⊟Accession numbers

• Gene ID:
• RefSeq:
• BioCyc:
• MicrobesOnline:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  601
  661
  721
  781
  841
  901
  
  ATGAAACAATCAGTTAATTTTAAAAGTAAAACAAATTTATTAGCAGCGAATTTATATACA
  CCAGAACAATTTGATGAAAGCAAAAAATATCCAGCAATTACAGTTTGTCACCCAGGTGGC
  GGTGTTAAAGAACAAACTGCAGGTATGTATGCAGAGAAACTTGCGGAATTCGGCTACGTT
  ACGGTTGTATATGATGCATCACATCAAGGTGAAAGTGAAGGCTCTCCTAGATATTTAGAA
  GATCCATTTGCGAGAACAGAAGACGTTAGAGCTTCAGTTGATTATCTTACAACATTAGAC
  TTTGTGGATAATGACAGAATTGGTGCGCTTGGCGTTTGTGCAGGTGGTGGATATACAGTA
  AGTGCAGCAAGAACAGAACGTCGCATTAAAGCACTTGCAACTGTAAGTATGGTAGATATT
  GGCGCTTTATTCCGTAAAGGTCCTGGCGATGTAGTATCAATAGATGATCAACTGGCATTT
  ATGACACAAGTTGCAGATCAACGTACAGCTGAAGCAAATGGTGCAGATTATGGTATCACT
  GGCTATGTGCCTGAAGAAATTGATGATTCTATGCCTGAAAATTCAACAATGGTACAAGGG
  CATGATTATTATTTAACTGCACGTGGTCAACATAAAAACGCACCAAACAAACTATTATTA
  AGAAGTTTTTCAGAAGTATTAACATTTGCGCCATTCACATATATTGATGAATTGTTGACA
  CAACCATTCTTAGCAATCGCAGGTACAGAAGCAGACACGATTGAATATAGCGTTGATGCT
  GTTGAAAAAGCAGCAGGCGACAACAATGAATTATATAAAATTGAAGGTGCATCACACGTA
  GATTTATATGATATTCCAGAATACGTAAATCAAGTGTTACCAAAACTTGAATCATTCTAT
  AAAGAAACTCTATAA
  60
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  915
  

⊟Protein

⊟General

• locus tag: JSNZ_000038
• symbol: JSNZ_000038
• description: alpha/beta hydrolase
• length: 304
• theoretical pI: 4.2987
• theoretical MW: 33387
• GRAVY: -0.316118

⊟Function

• TIGRFAM:
  Unknown function Enzymes of unknown specificity hydrolase CocE/NonD family protein (TIGR00976; HMM-score: 21.1)
  and 1 more
  exosortase A system-associated hydrolase 1 (TIGR03100; HMM-score: 13.4)
• TheSEED:
• PFAM:
  AB_hydrolase (CL0028) DLH; Dienelactone hydrolase family (PF01738; HMM-score: 39.6)
  Peptidase_S15; X-Pro dipeptidyl-peptidase (S15 family) (PF02129; HMM-score: 39.2)
  and 5 more
  PETase; PET hydrolase-like (PF12740; HMM-score: 22.8)
  Hydrolase_4; Serine aminopeptidase, S33 (PF12146; HMM-score: 19.6)
  Peptidase_S9; Prolyl oligopeptidase family (PF00326; HMM-score: 19.2)
  AXE1; Acetyl xylan esterase (AXE1) (PF05448; HMM-score: 18.8)
  BAAT_C; BAAT / Acyl-CoA thioester hydrolase C terminal (PF08840; HMM-score: 13.1)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• DeepLocPro: Cytoplasmic
  • Cytoplasmic Score: 0.948
  • Cytoplasmic Membrane Score: 0.0074
  • Cell wall & surface Score: 0.0012
  • Extracellular Score: 0.0433
• LocateP:
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.019739
  • TAT(Tat/SPI): 0.001062
  • LIPO(Sec/SPII): 0.001308
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI:
• RefSeq:
• UniProt:

⊟Protein sequence

• MKQSVNFKSKTNLLAANLYTPEQFDESKKYPAITVCHPGGGVKEQTAGMYAEKLAEFGYVTVVYDASHQGESEGSPRYLEDPFARTEDVRASVDYLTTLDFVDNDRIGALGVCAGGGYTVSAARTERRIKALATVSMVDIGALFRKGPGDVVSIDDQLAFMTQVADQRTAEANGADYGITGYVPEEIDDSMPENSTMVQGHDYYLTARGQHKNAPNKLLLRSFSEVLTFAPFTYIDELLTQPFLAIAGTEADTIEYSVDAVEKAAGDNNELYKIEGASHVDLYDIPEYVNQVLPKLESFYKETL

⊟Experimental data

• experimentally validated:
• protein localization:
• quantitative data / protein copy number per cell:
• interaction partners:

⊟Expression & Regulation

⊟Operon

⊟Regulation

• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊟Other Information

You can add further information about the gene and protein here. [edit]

⊟Literature

⊟References

⊟Relevant publications