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FunGene: 08-OCT-2024

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus JSNZ
  • locus tag: JSNZ_000634
  • pan locus tag?: SAUPAN002547000
  • symbol: JSNZ_000634
  • pan gene symbol?: rbf
  • synonym:
  • product: helix-turn-helix transcriptional regulator

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS, pseudogene
  • locus tag: JSNZ_000634
  • symbol: JSNZ_000634
  • product: helix-turn-helix transcriptional regulator
  • replicon: chromosome
  • strand: +
  • coordinates: 670790..672941
  • length: 2152
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Gene ID:
  • RefSeq:
  • BioCyc:
  • MicrobesOnline:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    ATGGAAAAATCATGCTTGCATATACTTACTAATAATGAATATGCGACAACGCGTTGCCAA
    GATGGCATAGTCTTATTTTGGCCAATTGACGGGGAAATCGAACTACAAAAATTTCGTAAA
    AGTAAAATAATTGAAGATGATATATATATTATTAATCATCTGGATGTATTTAGTATTAAG
    AATAATAAAAAAACGATCATGTTGTATTTGAGTAGCGATTGGTTTGCGGAATTAGGCTTT
    ACTTTCTTTAATTACCACTATACAGCAAAGTTGATTAAATCATCCTATAATTTGAAATGT
    CTACTATTAAAATTGACATATCGATACCTTGATAATCAGCCTCTTAATGACGCTGATATT
    AGAAAATTACAGGATATTATTAAAATCATTGCAAAAGAAGCAAGTATGGATAAAAAGATT
    GCACAAAATCAATATCGATATGCCTATTATGGTGATTTGCGTGACGAGCTCGAATATATT
    TATCAAAATGTAAATCAACGATTGACATTAAAAAGTGTCGCTGATAAATTATTTGTCTCA
    AAGTCAAATTTGTCATCACAATTCCACTTACTTATGGGCATGGGTTTTAAAAAAATATAT
    TGATACTTTGAAAATTGGTAAATCGATTGAAATTCTACTTACTACTGATAGTACTATTAG
    CAACATAAGTGAACATTTAGGTTTTAGTAGTAGCTCCACTTACTCTAAAATGTTTAAAAG
    TTATATGGATATAACACCGAATGAATATCGTAATTTATCAAAATATAATAAATGTTTAAT
    GCTAAAGCCAGAACCACTAGTAGGCAAAATGGTGCAAGAAGTAAAAGAAATCATATTGAA
    TTATATTGAACATTATAAAAACCACCTAACTGATGTTATACATATTGATGAAGACAAATT
    TGAAACACCTAAATTGTTTCAAACGGTTATTCAAATAAATACTTATACAGAAATGAAATT
    AGTTTTCTTAGAAGGAATCTTTAAAACCTTATTGAATAAGAACAGTCAAGTTGTCTTTTT
    CATCATGCCATCGATTCTAAAAAGTAAAAATACCATGTCCGAAGAAGAAAAATTCACAAT
    CATTAAAACAATAATTGAAAGTGATCTAAAGATAGCATTTAATATAAATGATATTGAAAC
    AACTTATTTTGTTGAAGAAGCTTTTATGAGTGTTTTCAGACAAATATCTCCAAACGAATT
    AAGTAATCATAATAATTACGAAGTGCATTTTGTTTTTGATTTATCATTGATGGAAATTAG
    AACAATTTATCGAATGATATTAAAATTACATAACATCATGTTGAATGTGAAATTAGGATT
    GAACATTACCTGTTTATTTGAAAAACCTTCAGTTTTTAAATCACTAGTATCACAAATAAA
    GCGACTTAAATTCGATTCGTTAATAATAGATAATGCAAATTTAAGTAGCCCTTATTTGAT
    GGGGGAAAGTGATGAGTTACTATTGAAAAATATTTTGCATTTTAAAAATTTAAAACAAGT
    AATTAATGAATTGGATATTGAACAAGAAAAGCTTATTTTTCTAAATGTTGAAAATCATAA
    ACTGCTTAATAATAAAGAACGAGATTTAAGTAATAGTGCTCCATTAATTTATAAGACATT
    AAGTGCGCTGTATCACAACTTTGATGGCTTTGGATTAAACATTTTTGACAATCATCATGC
    ATTTAATGCGATGCATCTATATGATAAAAATGGATTTAAAACAACACTAGGTCTTATATT
    AGAAAAGTTTATCGAATATGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTT
    TGATATAGAGAATTATTATTGTCTGGTTATTTATGATTGGCGAGTGATAGAGAGCGAGAC
    AATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAA
    CGATAAATATCTAATTGTAATAGAAACATTGGACGAAAATAGTGGCAACATTAATCATTT
    GATTTCTAAAGAATTAAGAGATAAATATGAATGGAACCCTAGTTTACTATCTAAAATTGA
    CAACTACCTTAAACCAGCAATAGAGATTAAAGAGCATAATTTTAGTGATAATTCCTTGAA
    TATTAACGTTACTTTTAATGCGTTATACATAATTAAAATAGGAAAAAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1620
    1680
    1740
    1800
    1860
    1920
    1980
    2040
    2100
    2152

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: JSNZ_000634
  • symbol: JSNZ_000634
  • description: helix-turn-helix transcriptional regulator
  • length:
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

⊟Function[edit | edit source]

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb:
  • DeepLocPro:
  • LocateP:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq:
  • UniProt:

⊟Protein sequence[edit | edit source]

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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