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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40


Summary[edit | edit source]

  • organism: Staphylococcus aureus NCTC8325
  • locus tag: S42 [1]
  • symbol: S42
  • synonym:
  • product: RNA feature, 3'UTR of SAOUHSC_00134, antisense RNA

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: misc_RNA
  • locus tag: S42 [1]
  • symbol: S42
  • product: RNA feature, 3'UTR of SAOUHSC_00134, antisense RNA
  • replicon: chromosome
  • strand: -
  • coordinates: 138934..140421
  • length: 1488
  • essential: unknown

Accession numbers[edit | edit source]

  • SRD:

Phenotype[edit | edit source]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    GTATAAAACGAAACGTGCGCCTATGACATAGATTAATGTTTTAGGCGCTACAATGTTTTA
    TTTATGTTAATTTGTCGAAGTATGGCTCATCTAATGGATTCAATTGCAAGTTTTCAATTT
    GCAACGTTGAATGTGCAATGCCATATTTTTCTTTCAACAATGATGATACTTGATCAATCG
    CTTGATAATCATCACCCTCATATTTTTTATCTAACACAACATGGGCACTTAATGAATAAT
    GCTCTGTTGTAATACTCCACAAATGAAATTCATGTACATCTAATATGCCATCTATGTTTT
    TAATATCTGCCATAATTTGATCAGTATCCAAATGTTGAGGCACACTTTCCATTAAAATTA
    ACCACGCATTACGCGTAATTTTATAACCACCACGTAAAATGATGAGTGAAATTACAATAC
    TAATGATTGGGTCGATGATGCGCCATCCTGTAAAGTAAATCAATACAACTGCAACGATGA
    CACCAATAGAGTTCAATAAGTCTCCCATGAAATGCCATAATGCACTTTGAATATTGATAT
    TGTCTTCTTGTTTTAAAGACCTTACAAGGATAACAGTCAAAATAATATTGACGAGTAAAC
    CAATACTAGCAATCATAAACATAATGCCACTTTCAATTGGTTGCGGATAAATAATACGTA
    CAATAGCTTCATATAAAATCCAGATTGAAATTACAATTAATGCTAAACCATTTAAAAATG
    CAGCTAATATCTCAAATCTTAAATATCCAAATGTGTATCGTGCAGTCGGCTTTTTACTTG
    CAAAATAAATGGCCAACATAGATAAACCAAGTGCTAATACATCACTAAGCATATGAAATG
    AATCTGACAGTAATGCCAATGAATTAGATACTAAACCTCCGACAAATTCAATCACTGTAA
    ATAACAATGTGATGATTAGTGATGCCCACAGCGTCTTTTTAGAACTTTGTTGAATTTTTT
    GATGATTGACATGATGAAAATATTTGTATCTGTTTATCGTATTCGCCTTTTTCCCATTCA
    TACGTTTGCCACTCCTAAATAAATGCGTCGTATTTAATATTGTCGCTTTTAAAAATAATT
    CTTTATAGCTTCTCAGGTTAATATTAATGCTTCCGTAATTAACCATGATTTATACATCAT
    CGTCATTTACATGACAACTCATTAATCTTTACCCTTTATAGCTTTATGTAATATCACCTT
    GGAAAACTTTTACAGCACACTCGCGCTTTGCTTTATTCCTATCATATAGAAAATTTTAAT
    AATGTACGAGATTATTGTGTTAGTTACATAAAAATGACAAAAAAGTATCTCAAATTTATT
    GTTTAGTTTCATTAAGTTCAAAAAATCGCAATAACTTTAATGATTGTTCCGCATATTAAA
    ACAAACGATGACTTTGCATATTGAACTTCATATTTCTAAATCACCATAATTAATAAACAA
    CTCTGTCCTTATAATAGCCGCATCGCAAATTAGCATAATTAAAAACAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1488

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]


Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

  1. 1.0 1.1 1.2 1.3 Ulrike Mäder, Pierre Nicolas, Maren Depke, Jan Pané-Farré, Michel Debarbouille, Magdalena M van der Kooi-Pol, Cyprien Guérin, Sandra Dérozier, Aurelia Hiron, Hanne Jarmer, Aurélie Leduc, Stephan Michalik, Ewoud Reilman, Marc Schaffer, Frank Schmidt, Philippe Bessières, Philippe Noirot, Michael Hecker, Tarek Msadek, Uwe Völker, Jan Maarten van Dijl
    Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions.
    PLoS Genet: 2016, 12(4);e1005962
    [PubMed:27035918] [WorldCat.org] [DOI] (I e)

Relevant publications[edit | edit source]