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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS08885 [old locus tag: SACOL1738 ]
  • pan locus tag?: SAUPAN004314000
  • symbol: SACOL_RS08885
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS08885 [old locus tag: SACOL1738 ]
  • symbol: SACOL_RS08885
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1770713..1772200
  • length: 1488
  • essential: unknown other strains

Accession numbers[edit | edit source]

  • Location: NC_002951 (1770713..1772200) NCBI
  • BioCyc: G1G4B-1861 BioCyc
  • MicrobesOnline: see SACOL1738

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    GTGAAAACAATTCAATTACACAAGACAACTTTGATATTAATTGCGATATTATTGTTTTAT
    ACTTTTATGGGTATCTTACTACCACTCATGCACGATGATTTACAATGGTTTAGCAATTAT
    AATACTGATATTTTAAAAGTAGGATTTGCATCACTTAATGGTCGCTATATCGGAAATATC
    TTTGAAATTATAGCTGTACATGTAAGCTGGTTACGTTGGCTTTCATATGGCCTCATTAGT
    ATGGGCATCATTTGGATGATTATGCACATTACACGTTGTAAAGCGTGGACAAGCTATTAT
    TTGTTAGCATTTTCTTTAATGTTAATTTTACCAAGTGCTATTTATGCAGATACATATGGC
    TGGTTTGCAGGATTTTATAATTATGCGACATCAACACTAATTTCACTCTTTATTATTTAT
    TATTGTATTAATGCAATTATATATAAAGAAAAGCAGCCGGTAAGTGTTACTGTACTATTC
    TATGTTTTATGCTTCTTCGGTCAATTATTTATGGAGAATGTGACATTATTCCACTGTATC
    ATTTTAATTTTAGCTTTTCTGTATGAATTTACTGCAAATCGAACACTTAATTATAAATTA
    TTGTTTTCATTTATGATTGCTACTATAGGTACAATCATTATGTTTTCCAATCCAAATTAT
    CGCAAAATTTTATTTGAAGGATCAGAATATCAACAAGTTTCAAATAATCAAGGTATCTTT
    TCAAAATTTGCAGAAATGATATCAACGTCACTTCCATATGGTGTCATTTTCAGTCAGATT
    ATAATTTTAAGTATGATTGCAGCGCTTATTATTTATCTACTGCTTAGAAGTGATCGGTAT
    GTACATTTAACAATATTAAAGCGTCGTATCATTATGATAGGATTTATCACTTTACCGCTT
    TATTATTTACTATTTTACAATCAGTTTTTATTAAATAAAAATACAGATATTGGATTGGTT
    GGTTTTGTGAACGTAATTGTATGTGGTTACTTTGCGTTTTCGATATTTGTAGGTATTTAT
    TTGTCTATTAATGATCGTAAAACACAAATCACTTTATATTCCTTACTTATTGCAATATGT
    GTTTCGGCGTCGACACTAGTCATTGTTACTCCAATAGAACCAGGTAATTTTTTGATTGTT
    TATACGATACATGTAATCATTTTAATTATTTTATTAAAAGAATTTCGGAAATATAAGTCA
    ATCAATGTTAATTTTATTAAAGGTGCATCACTAGTTTTAGCTGTGATATATCTTAGTGCA
    TTTATTTATGTTCATTATGAACATGAAAAAAGAGTTCAGTTATTAAAACAACAAATTAAA
    GATCATCCACGACAAGAGGTTTATACAGTGGAATCATTGCCGTTTGAACATTATATGCAT
    CATCCGTCACCAATCAATAAAAATTACCAAGAGTGGTTTAATAATTATGAAGAATTACCG
    AAAATGACCAAAGTTAAATATATTCCATTTGGTTCAGACGATTCATAA
    60
    120
    180
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    360
    420
    480
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    720
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    840
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    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1488

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL_RS08885 [old locus tag: SACOL1738 ]
  • symbol: SACOL_RS08885
  • description: hypothetical protein
  • length: 495
  • theoretical pI: 9.06777
  • theoretical MW: 57696.1
  • GRAVY: 0.604242

Function[edit | edit source]

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 13
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.030529
    • TAT(Tat/SPI): 0.000285
    • LIPO(Sec/SPII): 0.004642
  • predicted transmembrane helices (TMHMM): 13

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MKTIQLHKTTLILIAILLFYTFMGILLPLMHDDLQWFSNYNTDILKVGFASLNGRYIGNIFEIIAVHVSWLRWLSYGLISMGIIWMIMHITRCKAWTSYYLLAFSLMLILPSAIYADTYGWFAGFYNYATSTLISLFIIYYCINAIIYKEKQPVSVTVLFYVLCFFGQLFMENVTLFHCIILILAFLYEFTANRTLNYKLLFSFMIATIGTIIMFSNPNYRKILFEGSEYQQVSNNQGIFSKFAEMISTSLPYGVIFSQIIILSMIAALIIYLLLRSDRYVHLTILKRRIIMIGFITLPLYYLLFYNQFLLNKNTDIGLVGFVNVIVCGYFAFSIFVGIYLSINDRKTQITLYSLLIAICVSASTLVIVTPIEPGNFLIVYTIHVIILIILLKEFRKYKSINVNFIKGASLVLAVIYLSAFIYVHYEHEKRVQLLKQQIKDHPRQEVYTVESLPFEHYMHHPSPINKNYQEWFNNYEELPKMTKVKYIPFGSDDS

Experimental data[edit | edit source]

  • experimentally validated: see SACOL1738
  • protein localization: see SACOL1738
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]