PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000913000
• symbol^?: sirA
• synonym:
• description^?: iron ABC transporter substrate-binding protein

  descriptions from strain specific annotations:

  • iron ABC transporter substrate-binding protein
  • iron compound ABC transporter iron compound-binding protein SirA
  • iron-regulated ABC transporter, lipoprotein SirA
  • lipoprotein
  • periplasmic binding protein
  • siderophore compound ABC transporter binding protein
  • staphyloferrin B ABC transporter substrate-binding protein SirA
  • Siderophore staphylobactin ABC transporter, substrate-binding protein SirA
  • disulfide bond formation regulator protein SirA
  • iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein
  • iron (Fe3+) ABC transporter binding protein
  • iron compound ABC transporter, iron compound-binding protein SirA
  • iron-regulated ABC transporter siderophore-binding protein SirA
  • iron-regulated lipoprotein
  • periplasmic binding family protein
  • Staphylobactin-binding protein
• strand^?: -
• coordinates^?: 1181645..1182619
• synteny block^?: BlockID0004500
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0099 (sirA)
N315:
SA0111 (sirA)
NCTC8325:
SAOUHSC_00074
Newman:
NWMN_0059 (sirA)
USA300_FPR3757:
SAUSA300_0117 (sirA)
04-02981:
SA2981_0116 (sirA)
08BA02176:
C248_0103 (sirA)
11819-97:
MS7_0107 (sirA)
6850:
RSAU_000069 (sirA)
71193:
ST398NM01_0126
ECT-R 2:
ECTR2_71
ED133:
SAOV_0062 (sirA)
ED98:
SAAV_0083 (sirA)
HO 5096 0412:
SAEMRSA15_00810 (sirA)
JH1:
SaurJH1_0106
JH9:
SaurJH9_0102
JKD6008:
SAA6008_00093 (sirA)
JKD6159:
SAA6159_00098 (sirA)
LGA251:
SARLGA251_00900 (sirA)
M013:
M013TW_0105
MRSA252:
SAR0118 (sirA)
MSHR1132:
SAMSHR1132_00910
MSSA476:
SAS0089
Mu3:
SAHV_0114 (sirA)
Mu50:
SAV0115 (sirA)
MW2:
MW0088 (sirA)
RF122:
SAB0054c (sirA)
ST398:
SAPIG0126
T0131:
SAT0131_00101 (mecR1)
TCH60:
HMPREF0772_10382 (sirA)
TW20:
SATW20_01270 (sirA)
USA300_TCH1516:
USA300HOU_0126 (sirA)
VC40:
SAVC_00315

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
  N315            MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
  NCTC8325        MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
  Newman          MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
  USA300_FPR3757  MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
                  ************************************************************
  
  COL             QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
  N315            QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
  NCTC8325        QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
  Newman          QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
  USA300_FPR3757  QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
                  ************************************************************
  
  COL             ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
  N315            ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
  NCTC8325        ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
  Newman          ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
  USA300_FPR3757  ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
                  ************************************************************
  
  COL             KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
  N315            KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
  NCTC8325        KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
  Newman          KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
  USA300_FPR3757  KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
                  ************************************************************
  
  COL             LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
  N315            LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
  NCTC8325        LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
  Newman          LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
  USA300_FPR3757  LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
                  ************************************************************
  
  COL             ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
  N315            ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
  NCTC8325        ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
  Newman          ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
  USA300_FPR3757  ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
                  ******************************