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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000948000
- symbol?: deoD1
- synonym:
- description?: purine nucleoside phosphorylase
- purine nucleoside phosphorylase
- purine nucleoside phosphorylase, putative
- pseudogene
- putative purine nucleoside phosphorylase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1208513..1209305
- synteny block?: BlockID0004840
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0137 (pnp)
08BA02176:
C248_0125 (deoD1)
11819-97:
MS7_0127
6850:
RSAU_000090 (deoD1)
71193:
ST398NM01_0150
ECT-R 2:
ECTR2_92 (deoD)
ED133:
SAOV_0083 (deoD1)
ED98:
SAAV_0104 (deoD1)
HO 5096 0412:
SAEMRSA15_01020 (deoD1)
JH1:
SaurJH1_0127
JH9:
SaurJH9_0122
JKD6008:
SAA6008_00114 (pnp)
JKD6159:
SAA6159_00119 (pnp)
LGA251:
SARLGA251_01100 (deoD1)
M013:
M013TW_0126
MRSA252:
SAR0138 (deoD1)
MSHR1132:
SAMSHR1132_01120
MSSA476:
SAS0110
Mu3:
SAHV_0135 (pnp)
Mu50:
SAV0136 (pnp)
MW2:
MW0110 (pnp)
RF122:
SAB0075 (deoD1)
ST398:
SAPIG0150 (deoD)
T0131:
SAT0131_00124 (efp)
TCH60:
HMPREF0772_10362 (deoD)
TW20:
SATW20_01470 (deoD1)
USA300_TCH1516:
USA300HOU_0148 (deoD1)
VC40:
SAVC_00425
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKV
N315 MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKV
NCTC8325 MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKV
Newman MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKV
USA300_FPR3757 MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKV
************************************************************
COL SVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQ
N315 SVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQ
NCTC8325 SVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQ
Newman SVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQ
USA300_FPR3757 SVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQ
************************************************************
COL QYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILG
N315 QYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILG
NCTC8325 QYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILG
Newman QYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILG
USA300_FPR3757 QYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILG
************************************************************
COL VEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV
N315 VEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV
NCTC8325 VEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV
Newman VEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV
USA300_FPR3757 VEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV
*******************************************************