PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000990000
• symbol^?: capL
• synonym:
• description^?: glycosyltransferase WbuB

  descriptions from strain specific annotations:

  • glycosyltransferase WbuB
  • capsular polysaccharide biosynthesis protein Cap5L
  • cap5L protein/glycosyltransferase
  • capsular polysaccharide biosynthesis protein glycosyltransferase CapL
  • capsular polysaccharide synthesis enzyme CapL
  • capsular polysaccharide synthesis protein Cap5L
  • glycosyltransferase family 4 protein
  • capsular polysaccharide synthesis enzyme Cap5L
  • cap8L
  • capsular polysaccharide biosynthesis protein CapL
  • capsular polysaccharide synthesis enzyme Cap8L
  • glycosyl transferases group 1 family protein
  • group 1 glycosyl transferase
• strand^?: +
• coordinates^?: 1258821..1260400
• synteny block^?: BlockID0005230
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0147 (cap5L)
N315:
SA0155 (capL)
NCTC8325:
SAOUHSC_00125
Newman:
NWMN_0106 (capL)
USA300_FPR3757:
SAUSA300_0163 (cap5L)
04-02981:
SA2981_0161 (capL)
08BA02176:
C248_0149 (capL)
11819-97:
MS7_0154
6850:
RSAU_000114 (capL)
71193:
ST398NM01_0174
ECT-R 2:
ECTR2_117
ED133:
SAOV_0107
ED98:
SAAV_0128 (cap5L)
HO 5096 0412:
SAEMRSA15_01260 (capL)
JH1:
SaurJH1_0151
JH9:
SaurJH9_0146
JKD6008:
SAA6008_00138 (cap5L)
JKD6159:
SAA6159_00144 (cap5L)
LGA251:
SARLGA251_01340 (capL)
M013:
M013TW_0150
MRSA252:
SAR0162 (capL)
MSHR1132:
SAMSHR1132_01340
MSSA476:
SAS0135
Mu3:
SAHV_0159 (capL)
Mu50:
SAV0160 (capL)
MW2:
MW0135 (cap8L)
RF122:
SAB0101 (capL)
ST398:
SAPIG0174
T0131:
SAT0131_00151
TCH60:
HMPREF0772_10338 (cap5L)
TW20:
SATW20_01710 (capL)
USA300_TCH1516:
USA300HOU_0174 (cap5L)
VC40:
SAVC_00570

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMH
  N315            MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMH
  NCTC8325        MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMH
  Newman          MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMH
  USA300_FPR3757  MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMH
                  ************************************************************
  
  COL             RGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDV
  N315            RGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDV
  NCTC8325        RGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDV
  Newman          RGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDV
  USA300_FPR3757  RGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDV
                  ************************************************************
  
  COL             LHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKN
  N315            LHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKN
  NCTC8325        LHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKN
  Newman          LHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKN
  USA300_FPR3757  LHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKN
                  ************************************************************
  
  COL             YLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDME
  N315            YLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDME
  NCTC8325        YLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDME
  Newman          YLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDME
  USA300_FPR3757  YLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDME
                  ************************************************************
  
  COL             TLISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIAD
  N315            TLISFLKLNKDQPQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIAD
  NCTC8325        TLISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIAD
  Newman          TLISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIAD
  USA300_FPR3757  TLISFLKLNKDQSQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIAD
                  ************.***********************************************
  
  COL             VCIASLIKEGVGLGVPSKNYGYLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAI
  N315            VCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAI
  NCTC8325        VCIASLIKEGVGLGVPSKNYGYLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAI
  Newman          VCIASLIKEGVGLGVPSKNYGYLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAI
  USA300_FPR3757  VCIASLIKEGVGLGVPSKNYGYLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAI
                  ***************************.********************************
  
  COL             YNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK
  N315            YNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK
  NCTC8325        YNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK
  Newman          YNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK
  USA300_FPR3757  YNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK
                  *****************************************