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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001243000
- symbol?: —
- synonym:
- description?: histidine transporter
- histidine transporter
- YjiH family protein
- membrane spanning protein
- nucleoside recognition domain-containing protein
- Nucleoside recognition domain protein
- nucleoside recognition family protein
- putative histidine uptake transporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1528295..1529608
- synteny block?: BlockID0007540
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0318
08BA02176:
C248_0308
11819-97:
MS7_0309
6850:
RSAU_000265
71193:
ST398NM01_0332
ECT-R 2:
ECTR2_279
ED133:
SAOV_0272
ED98:
SAAV_0286
HO 5096 0412:
SAEMRSA15_02750
JH1:
SaurJH1_0309
JH9:
SaurJH9_0302
JKD6008:
SAA6008_00295
JKD6159:
SAA6159_00295
LGA251:
SARLGA251_02810
M013:
M013TW_0300
MRSA252:
SAR0316
MSHR1132:
SAMSHR1132_02930
MSSA476:
SAS0296
Mu3:
SAHV_0316
Mu50:
SAV0319
MW2:
MW0296
RF122:
SAB0256c
ST398:
SAPIG0332
T0131:
SAT0131_00324 (sirA)
TCH60:
HMPREF0772_10176
TW20:
SATW20_03240
USA300_TCH1516:
USA300HOU_0339
VC40:
SAVC_01345
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ----------------MNQYHSNAQQPSAWRFFVYSLVGILCFFIPFTINGNNTIFVDHV
N315 ----------------MNQYHSNAQQPSAWRFFVYSLVGILCFFIPFTINGNNTIFVDHV
NCTC8325 ----------------MNQYHSNAQQPSAWRFFVYSLVGILCFFIPFTINGNNTIFVDHV
Newman MHHTVLCIHLNKGVALMNQYHSNAQQPSAWRFFVYSLVGILCFFIPFTINGNNTIFVDHV
USA300_FPR3757 ----------------MNQYHSNAQQPSAWRFFVYSLVGILCFFIPFTINGNNTIFVDHV
********************************************
COL HLAIRSIIGPLMPYVALIMILIGTALPIVRRTFMTSITNLVITLFKVAGAMIGIMYVFKI
N315 HLAIRSIIGPLMPYVALIMILIGTALPIVRRTFMTSITNLVITLFKVAGAMIGIMYVFKI
NCTC8325 HLAIRSIIGPLMPYVALIMILIGTALPIVRRTFMTSITNLVITLFKVAGAMIGIMYVFKI
Newman HLAIRSIIGPLMPYVALIMILIGTALPIVRRTFMTSITNLVITLFKVAGAMIGIMYVFKI
USA300_FPR3757 HLAIRSIIGPLMPYVALIMILIGTALPIVRRTFMTSITNLVITLFKVAGAMIGIMYVFKI
************************************************************
COL GPSILFKANYGPFLFEKLMMPLSILIPVGAIALSLLVGYGLLEFVGVYMEPIMRPIFKTP
N315 GPSILFKANYGPFLFEKLMMPLSILIPVGAIALSLLVGYGLLEFVGVYMEPIMRPIFKTP
NCTC8325 GPSILFKANYGPFLFEKLMMPLSILIPVGAIALSLLVGYGLLEFVGVYMEPIMRPIFKTP
Newman GPSILFKANYGPFLFEKLMMPLSILIPVGAIALSLLVGYGLLEFVGVYMEPIMRPIFKTP
USA300_FPR3757 GPSILFKANYGPFLFEKLMMPLSILIPVGAIALSLLVGYGLLEFVGVYMEPIMRPIFKTP
************************************************************
COL GKSAVDAVASFVGSYSLGLLITNRVYKQGMYNKREATIIATGFSTVSATFMIIVAKTLGL
N315 GKSAVDAVASFVGSYSLGLLITNRVYKQGMYNKREATIIATGFSTVSATFMIIVAKTLGL
NCTC8325 GKSAVDAVASFVGSYSLGLLITNRVYKQGMYNKREATIIATGFSTVSATFMIIVAKTLGL
Newman GKSAVDAVASFVGSYSLGLLITNRVYKQGMYNKREATIIATGFSTVSATFMIIVAKTLGL
USA300_FPR3757 GKSAVDAVASFVGSYSLGLLITNRVYKQGMYNKREATIIATGFSTVSATFMIIVAKTLGL
************************************************************
COL MPHWNLYFWITLVITFVVTAITAWLPPISNESTEYYNGQEGEQEVAIEGSRLKTAYAEAM
N315 MPHWNLYFWITLVITFVVTAITAWLPPITNESTEYYNGQEGEQEVAIEGSRLKTAYAEAM
NCTC8325 MPHWNLYFWITLVITFVVTAITAWLPPISNESTEYYNGQEGEQEVAIEGSRLKTAYAEAM
Newman MPHWNLYFWITLVITFVVTAITAWLPPISNESTEYYNGQEGEQEVAIEGSRLKTAYAEAM
USA300_FPR3757 MPHWNLYFWITLVITFVVTAITAWLPPISNESTEYYNGQEGEQEVAIEGSRLKTAYAEAM
****************************:*******************************
COL KQNALTPSLVKNVWDNLKDGLEMTVGILPSILSIGFLGLIVANYTPFIDWLGYIFYPFIY
N315 KQNALTPSLVKNVWDNFKDGLEMTVGILPSILSIGFLGLIVANYTPFIDWLGYIFYPFIY
NCTC8325 KQNALTPSLVKNVWDNLKDGLEMTVGILPSILSIGFLGLIVANYTPFIDWLGYIFYPFIY
Newman KQNALTPSLVKNVWDNLKDGLEMTVGILPSILSIGFLGLIVANYTPFIDWLGYIFYPFIY
USA300_FPR3757 KQNALTPSLVKNVWDNLKDGLEMTVGILPSILSIGFLGLIVANYTPFIDWLGYIFYPFIY
****************:*******************************************
COL IFPIADQALLAKASAISIVEMFLPSLLVTKAAMSTKFVVGVVSVSAIIFFSALVPCILAT
N315 IFPIADQAVLAKASAISIVEMFLPSLLVTKAAMSTKFVVGVVSVSAIIFFSALVPCILAT
NCTC8325 IFPIADQALLAKASAISIVEMFLPSLLVTKAAMSTKFVVGVVSVSAIIFFSALVPCILAT
Newman IFPIADQALLAKASAISIVEMFLPSLLVTKAAMSTKFVVGVVSVSAIIFFSALVPCILAT
USA300_FPR3757 IFPIADQALLAKASAISIVEMFLPSLLVTKAAMSTKFVVGVVSVSAIIFFSALVPCILAT
********:***************************************************
COL EIKIPVWKLIIIWFLRVALSLLITIPVALLIFG
N315 EIKIPVWKLIIIWFLRVALSLLITIPVALLIFG
NCTC8325 EIKIPVWKLIIIWFLRVALSLLITIPVALLIFG
Newman EIKIPVWKLIIIWFLRVALSLLITIPVALLIFG
USA300_FPR3757 EIKIPVWKLIIIWFLRVALSLLITIPVALLIFG
*********************************