PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001708000
• symbol^?: —
• synonym:
• description^?: phage tail fiber

  descriptions from strain specific annotations:

  • phage tail fiber
  • phage tail fiber protein
  • tail protein
• strand^?: +
• coordinates^?: 2052626..2053798
• synteny block^?: BlockID0011290
• occurrence^?: in 15% of 33 strains

⊟Orthologs

COL:
—
N315:
—
NCTC8325:
SAOUHSC_02022
Newman:
NWMN_1772
USA300_FPR3757:
—
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
SaurJH1_0373
JH9:
SaurJH9_0364
JKD6008:
SAA6008_01837
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
—
VC40:
—

⊟Genome Viewer

NCTC8325
Newman

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  NCTC8325        MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLF
  Newman          MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLF
                  ************************************************************
  
  NCTC8325        MEDGSIFKNEPLIIDDVVKGFLTYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIV
  Newman          MEDGSIFKNEPLIIDDVVKGFLTYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIV
                  ************************************************************
  
  NCTC8325        DSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEKIDKDVISYIEKNESRFKGAK
  Newman          DSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEKIDKDVISYIEKNESRFKGAK
                  ************************************************************
  
  NCTC8325        GDKGEPGQPGAKGEAGKKGEQGAPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKIN
  Newman          GDKGEPGQPGAKGEAGKKGEQGAPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKIN
                  ************************************************************
  
  NCTC8325        IANVEGLENKLQEVEKIKDTTLNDSKTYTDTKIAELVDSAPESMNTLRELAEAIQNNSIS
  Newman          IANVEGLEDKLQEVEKIKDTTLNDSKTYTDTKIAELVDSAPESMNTLRELAEAIQNNSIS
                  ********:***************************************************
  
  NCTC8325        ESVLQQIGSKVNTEDFEEFKQTLNDLYAPKNHNHDERYVLSSQAFTKQQADNLYQLKSAS
  Newman          ESVLQQIGSKVSTEDFEEFKQTLNDLYAPKNHNHDERYVLSSQAFTKQQADSLYQLKSAS
                  ***********.***************************************.********
  
  NCTC8325        QPTVKIWTGTENEYNYIYQKDPNTLYLIKG
  Newman          QPTVKIWTGTENEYNYIYQKDPNTLYLIKG
                  ******************************