PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001817000
• symbol^?: —
• synonym:
• description^?: phiSLT ORF96-like protein

  descriptions from strain specific annotations:

  • phiSLT ORF96-like protein
  • phage protein
• strand^?: -
• coordinates^?: 2253317..2253607
• synteny block^?: BlockID0011930
• occurrence^?: in 52% of 33 strains

⊟Orthologs

COL:
SACOL0382
N315:
—
NCTC8325:
SAOUHSC_01522
Newman:
—
USA300_FPR3757:
SAUSA300_1390
04-02981:
—
08BA02176:
C248_0364
11819-97:
MS7_1453
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_0334
ED98:
SAAV_2017
HO 5096 0412:
SAEMRSA15_13590
JH1:
SaurJH1_1094
JH9:
SaurJH9_1073
JKD6008:
—
JKD6159:
SAA6159_01362
LGA251:
—
M013:
—
MRSA252:
SAR1504
MSHR1132:
—
MSSA476:
SAS0947
Mu3:
—
Mu50:
—
MW2:
MW1387
RF122:
—
ST398:
SAPIG0389
T0131:
—
TCH60:
HMPREF0772_11705
TW20:
—
USA300_TCH1516:
USA300HOU_1438
VC40:
—

⊟Genome Viewer

COL
NCTC8325
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MATEEVKIKALLENDKQYFPATHWKAINGIPYAGSSDIDGLPQDGIISVDDKNKLDKLKI
  NCTC8325        MATEEVKIKALLENDKQYFPATHWKAINGIPYAGSSDIDGLPQDGIISVNDKNKLDNLKI
  USA300_FPR3757  MATEEVKIKALLENDKQYFPATHWKAINGIPYAGSSDIDGLPQDGIISVDDKNKLDKLKI
                  *************************************************:******:***
  
  COL             GEAGIIQNSIVQKSPNGKLWKITVDDSGKLGTVLFY
  NCTC8325        GEAGIIQNSIVQKSPNGKLWKITVDDSGKLGTVLFY
  USA300_FPR3757  GEAGIIQNSIVQKSPNGKLWKITVDDSGKLGTVLFY
                  ************************************