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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001894000
- symbol?: —
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein, putative
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter family protein
- multidrug ABC transporter ATPase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2381299..2382147
- synteny block?: BlockID0012670
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0349
08BA02176:
C248_0406
11819-97:
MS7_0341
6850:
RSAU_000296
71193:
ST398NM01_0431
ECT-R 2:
ECTR2_312
ED133:
SAOV_0375
ED98:
SAAV_0319
HO 5096 0412:
SAEMRSA15_03060
JH1:
SaurJH1_0409
JH9:
SaurJH9_0399
JKD6008:
SAA6008_00328
JKD6159:
SAA6159_00325
LGA251:
SARLGA251_03130
M013:
M013TW_0330
MRSA252:
SAR0348
MSHR1132:
SAMSHR1132_03240
MSSA476:
SAS0327
Mu3:
SAHV_0348
Mu50:
SAV0351
MW2:
MW0327
RF122:
SAB0301
ST398:
SAPIG0431
T0131:
SAT0131_00358 (rplT)
TCH60:
HMPREF0772_10143
TW20:
SATW20_04190
USA300_TCH1516:
USA300HOU_0372
VC40:
SAVC_01505
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTTLLNVDSVNKQYKDSDFKLQDASLTISTNETVGLIGKNGSGKSTLINILVGNRHKDNG
N315 MTTLLNVDRVNKQYKDSDFKLQDASLTISTNETVGLIGKNGSGKSTLINILVGNRHKDNG
NCTC8325 MTTLLNVDSVNKQYKDSDFKLQDASLTISTNETVGLIGKNGSGKSTLINILVGNRHKDNG
Newman MTTLLNVDSVNKQYKDSDFKLQDASLTISTNETVGLIGKNGSGKSTLINILVGNRHKDNG
USA300_FPR3757 MTTLLNVDSVNKQYKDSDFKLQDASLTISTNETVGLIGKNGSGKSTLINILVGNRHKDNG
******** ***************************************************
COL SITFFGEEHTVDDVEYKEHIGVVFDDLRVPNKLTIKDIDKVFQSIYMTWNSQKFFDLIKY
N315 SIAFFGEEHAADDVEYKEHIGVVFDDLRVPNKLTIKDIDKVFQSIYTTWNSQKFFDLIKY
NCTC8325 SITFFGEEHTVDDVEYKEHIGVVFDDLRVPNKLTIKDIDKVFQSIYMTWNSQKFFDLIKY
Newman SITFFGEEHTVDDVEYKEHIGVVFDDLRVPNKLTIKDIDKVFQSIYMTWNSQKFFDLIKY
USA300_FPR3757 SITFFGEEHTVDDVEYKEHIGVVFDDLRVPNKLTIKDIDKVFQSIYMTWNSQKFFDLIKY
**:******:.*********************************** *************
COL FELPLQTKIKTFSRGMRMKIALTIALSHDVKLLILDEATAGMDVSGREEVMEILEDFVAQ
N315 FELPLQTKIKTFSRGMRMKIALTIALSHDVKLLILDEATAGMDVSGREEVMELLEDFVAQ
NCTC8325 FELPLQTKIKTFSRGMRMKIALTIALSHDVKLLILDEATAGMDVSGREEVMEILEDFVAQ
Newman FELPLQTKIKTFSRGMRMKIALTIALSHDVKLLILDEATAGMDVSGREEVMEILEDFVAQ
USA300_FPR3757 FELPLQTKIKTFSRGMRMKIALTIALSHDVKLLILDEATAGMDVSGREEVMEILEDFVAQ
****************************************************:*******
COL GGGILISSHISEDIEHLADKLVFMKDGRMILTEQKDILLAQYGIVTTEDKDVEIPKHLII
N315 GGGILISSHISEDIEQLADKLVFMKDGRMILTEQKDILLAQYGIVTTGDKDVEIPKHLII
NCTC8325 GGGILISSHISEDIEHLADKLVFMKDGRMILTEQKDILLAQYGIVTTEDKDVEIPKHLII
Newman GGGILISSHISEDIEHLADKLVFMKDGRMILTEQKDILLAQYGIVTTEDKDVEIPKHLII
USA300_FPR3757 GGGILISSHISEDIEHLADKLVFMKDGRMILTEQKDILLAQYGIVTTEDKDVEIPKHLII
***************:******************************* ************
COL ASRLSKGKYQILVKDYAEIENAEPLKHIDDATKIIMRGEV
N315 ASRLSKGKYQILVKDYAEIENAEPLKHIDDATKIIMRGEV
NCTC8325 ASRLSKGKYQILVKDYAEIENAEPLKHIDDATKIIMRGEV
Newman ASRLSKGKYQILVKDYAEIENAEPLKHIDDATKIIMRGEV
USA300_FPR3757 ASRLSKGKYQILVKDYAEIENAEPLKHIDDATKIIMRGEV
****************************************