PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001979000
• symbol^?: —
• synonym:
• description^?: hypothetical protein
• strand^?: -
• coordinates^?: 2446315..2446506
• synteny block^?: BlockID0013320
• occurrence^?: in 67% of 33 strains

⊟Orthologs

COL:
SACOL0450
N315:
SA0364
NCTC8325:
SAOUHSC_00363
Newman:
NWMN_0370
USA300_FPR3757:
SAUSA300_0378
04-02981:
SA2981_0378
08BA02176:
—
11819-97:
MS7_0369
6850:
RSAU_000322
71193:
—
ECT-R 2:
ECTR2_339
ED133:
SAOV_0402c
ED98:
SAAV_0346
HO 5096 0412:
—
JH1:
SaurJH1_0438
JH9:
SaurJH9_0427
JKD6008:
SAA6008_00379
JKD6159:
—
LGA251:
SARLGA251_03400
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_0376
Mu50:
SAV0379
MW2:
—
RF122:
SAB0329c
ST398:
—
T0131:
SAT0131_00412
TCH60:
—
TW20:
SATW20_04460
USA300_TCH1516:
USA300HOU_0402
VC40:
SAVC_01650

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MINLIYTTRCAIMLKVCTSRKQINMKNDIEKEKYVNEIIMLLRTIPTSKLVQPIMQLFID
  N315            ----------------------------------MNEIIMLLRTIPTSKLIQPIMQLFID
  NCTC8325        MINLIYTTRCAIMLKVCTSRKQINMKNDIEKEKYVNEIIMLLRTIPTSKLVQPIMQLFID
  Newman          MINLIYTTRCAIMLKVCTSRKQINMKNDIEKEKYVNEIIMLLRTIPTSKLVQPIMQLFID
  USA300_FPR3757  MINLIYTTRCAIMLKVCTSRKQINMKNDIEKEKYVNEIIMLLRTIPTSKLVQPIMQLFID
                                                    :***************:*********
  
  COL             KAILNNVQNDALLIEKATHARNHLRLWSLQGHRDIPN
  N315            NAILNIVQNDALLIEKATHARNHLRLWSLQGHRDIPN
  NCTC8325        KAILNNVQNDALLIEKATHARNHLRLWSLQGHRDIPN
  Newman          KAILNNVQNDALLIEKATHARNHLRLWSLQGHRDIPN
  USA300_FPR3757  KAILNNVQNDALLIEKATHARNHLRLWSLQGHRDIPN
                  :**** *******************************