PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002113000
• symbol^?: ssl7
• synonym:
• description^?: staphylococcal superantigen-like protein 7

  descriptions from strain specific annotations:

  • staphylococcal superantigen-like protein 7
  • superantigen-like protein 7
  • superantigen-like protein SSL7
  • exotoxin 1
  • Exotoxin 11
  • exotoxin 5
  • staphylococcal/Streptococcal toxin, beta-grasp domain protein
  • Staphylococcal enterotoxin-like toxin
  • staphylococcal exotoxin
• strand^?: +
• coordinates^?: 2601159..2601854
• synteny block^?: BlockID0014190
• occurrence^?: in 94% of 33 strains

⊟Orthologs

COL:
—
N315:
SA0387 (set11)
NCTC8325:
SAOUHSC_00392
Newman:
NWMN_0394 (set7nm)
USA300_FPR3757:
SAUSA300_0401
04-02981:
SA2981_0402 (set11)
08BA02176:
C248_0479 (set1)
11819-97:
MS7_0402
6850:
RSAU_000356
71193:
ST398NM01_0496
ECT-R 2:
ECTR2_362
ED133:
SAOV_0447
ED98:
SAAV_0370
HO 5096 0412:
SAEMRSA15_03580 (set1)
JH1:
SaurJH1_0462
JH9:
SaurJH9_0450
JKD6008:
SAA6008_00430 (set11)
JKD6159:
—
LGA251:
SARLGA251_03650 (set1)
M013:
M013TW_0388
MRSA252:
SAR0428 (set1)
MSHR1132:
SAMSHR1132_03760
MSSA476:
SAS0390
Mu3:
SAHV_0424 (set11)
Mu50:
SAV0426 (set11)
MW2:
MW0388 (set22)
RF122:
SAB0380 (set5)
ST398:
SAPIG0496
T0131:
SAT0131_00466
TCH60:
HMPREF0772_10089 (set1)
TW20:
SATW20_05030 (set1)
USA300_TCH1516:
USA300HOU_0429 (set22)
VC40:
SAVC_01765

⊟Genome Viewer

N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            MKLKTLAKATLALGLLTTGVITSEGQAVHAKEKQERVQHLYDIKDLYRYYSSESFEFSNI
  NCTC8325        MKLKTLAKATLALGLLTTGVITSEGQAVQAKEKQERVQHLYDIKDLHRYYSSESFEFSNI
  Newman          MKLKTLAKATLALGLLTTGVITSEGQAVQAKEKQERVQHLYDIKDLHRYYSSESFEFSNI
  USA300_FPR3757  MKLKTLAKATLALGLLTTGVITSEGQAVQAKEKQERVQHLYDIKDLHRYYSSESFEFSNI
                  ****************************:*****************:*************
  
  N315            SGKVENYNGSNVVRFNQEKQNHQLFLLGKDKDKYKKGLEGQNVFVVKELIDPNGRLSTVG
  NCTC8325        SGKVENYNGSNVVRFNQENQNHQLFLLGKDKEKYKEGIEGKDVFVVKELIDPNGRLSTVG
  Newman          SGKVENYNGSNVVRFNQENQNHQLFLLGKDKEKYKEGIEGKDVFVVKELIDPNGRLSTVG
  USA300_FPR3757  SGKVENYNGSNVVRFNQENQNHQLFLLGKDKEKYKEGIEGKDVFVVKELIDPNGRLSTVG
                  ******************:************:***:*:**::******************
  
  N315            GVTKKNNKSSETNTHLFVNKVYGGNLDASIDSFLINKEEVSLKELDFKIRKQLVEKYGLY
  NCTC8325        GVTKKNNKSSETNTHLFVNKVYGGNLDASIDSFSINKEEVSLKELDFKIRQHLVKNYGLY
  Newman          GVTKKNNKSSETNTHLFVNKVYGGNLDASIDSFSINKEEVSLKELDFKIRQHLVKNYGLY
  USA300_FPR3757  GVTKKNNKSSETNTHLFVNKVYGGNLDASIDSFSINKEEVSLKELDFKIRQHLVKNYGLY
                  ********************************* ****************::**::****
  
  N315            KGTTKYGKITINLKDEKKEVIDLGDKLQFERMGDVLNSKDIQNIAVTINQI
  NCTC8325        KGTTKYGKITINLKDGEKQEIDLGDKLQFERMGDVLNSKDINKIEVTLKQI
  Newman          KGTTKYGKITINLKDGEKQEIDLGDKLQFERMGDVLNSKDINKIEVTLKQI
  USA300_FPR3757  KGTTKYGKITINLKDGEKQEIDLGDKLQFERMGDVLNSKDINKIEVTLKQI
                  *************** :*: *********************::* **::**