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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002176000
- symbol?: gmpA
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- methionine import ATP-binding protein MetN 1
- methionine ABC transporter ATP-binding protein
- methionine uptake ABC transporter, ATP-binding protein
- methionine import ATP-binding protein metN
- ABC superfamily ATP binding cassette transporter, ABC protein
- DL-methionine transporter ATP-binding subunit
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2680429..2681458
- synteny block?: BlockID0014770
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0437
08BA02176:
C248_0511
11819-97:
MS7_0435 (metN)
6850:
RSAU_000394 (metN)
71193:
ST398NM01_0527
ECT-R 2:
ECTR2_395
ED133:
SAOV_0479
ED98:
SAAV_0404
HO 5096 0412:
SAEMRSA15_03870
JH1:
SaurJH1_0496
JH9:
SaurJH9_0483
JKD6008:
SAA6008_00465 (metN)
JKD6159:
SAA6159_00411 (metN)
LGA251:
SARLGA251_03950
M013:
M013TW_0426
MRSA252:
SAR0461
MSHR1132:
SAMSHR1132_04060
MSSA476:
SAS0419
Mu3:
SAHV_0459
Mu50:
SAV0462
MW2:
MW0416
RF122:
SAB0411
ST398:
SAPIG0527
T0131:
SAT0131_00501
TCH60:
HMPREF0772_10061 (metN)
TW20:
SATW20_05300
USA300_TCH1516:
—
VC40:
SAVC_01895
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIEFRQVSKTFNKKKQKIDALKDVSFTVNRNDIFGVIGYSGAGKSTLVRLVNHLEAASNG
N315 MIEFRQVSKSFHKKKQTIDALKDVSFTVNRNDIFGVIGYSGAGKSTLVRLVNHLEAASNG
NCTC8325 MIEFRQVSKTFNKKKQKIDALKDVSFTVNRNDIFGVIGYSGAGKSTLVRLVNHLEAASNG
Newman ----------------------------------------------MVRLVNHLEAASNG
USA300_FPR3757 MIEFRQVSKTFNKKKQKIDALKDVSFTVNRNDIFGVIGYSGAGKSTLVRLVNHLEAASNG
:*************
COL QVIVDGHDITNYSDKMMRDIKKDIGMIFQHFNLLNSATVFKNVAMPLILSKKSKTEIKQR
N315 QVIVDGHDITNYSEKGMREIKKDIGMIFQHFNLLNSATVFKNVAMPLILSKKSKTEIKQR
NCTC8325 QVIVDGHDITNYSDKMMRDIKKDIGMIFQHFNLLNSATVFKNVAMPLILSKKSKTEIKQR
Newman QVIVDGHDITNYSDKMMRDIKKDIGMIFQHFNLLNSATVFKNVAMPLILSKKSKTEIKQR
USA300_FPR3757 QVIVDGHDITNYSDKMMRDIKKDIGMIFQHFNLLNSATVFKNVAMPLILSKKSKTEIKQR
*************:* **:*****************************************
COL VTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPATTASIL
N315 VTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPATTASIL
NCTC8325 VTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPATTASIL
Newman VTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPATTASIL
USA300_FPR3757 VTEMLEFVGLSDKKDQFPDELSGGQKQRVAIARALVTNPKILLCDEATSALDPATTASIL
************************************************************
COL TLLKNVNQTFGITIMMITHEMRVIKDICNRVAVMEKGKVVETGTVKEVFSHPKTTIAQNF
N315 TLLKNVNQTFGITIMMITHEMRVIKDICNRVAVMEKGQVVETGTVKEVFSHPKTTIAQNF
NCTC8325 TLLKNVNQTFGITIMMITHEMRVIKDICNRVAVMEKGKVVETGTVKEVFSHPKTTIAQNF
Newman TLLKNVNQTFGITIMMITHEMRVIKDICNRVAVMEKGKVVETGTVKEVFSHPKTTIAQNF
USA300_FPR3757 TLLKNVNQTFGITIMMITHEMRVIKDICNRVAVMEKGKVVETGTVKEVFSHPKTTIAQNF
*************************************:**********************
COL VSTVIQTEPSTSLIRRLNDEQVGDFKDYKIFVEETQVTQPIINDLIQICGREVKILFSSM
N315 VSTVIQTEPSTSLIRRLNDEQVGGFKDYKIFVEETQVTQPIINDLIQICGREVKILFSSM
NCTC8325 VSTVIQTEPSTSLIRRLNDEQVGDFKDYKIFVEETQVTQPIINDLIQICGREVKILFSSM
Newman VSTVIQTEPSTSLIRRLNDEQVGDFKDYKIFVEETQVTQPIINDLIQICGREVKILFSSM
USA300_FPR3757 VSTVIQTEPSTSLIRRLNDEQVGDFKDYKIFVEETQVTQPIINDLIQICGREVKILFSSM
***********************.************************************
COL SEIQGNTVCYMWLRFNMDQQFEDTAINQYFKEKNIQFEEVH
N315 SEIQGNTVCYMWLRFNIDQQFDDTAINQYFKEKNIQFEEVH
NCTC8325 SEIQGNTVCYMWLRFNMDQQFEDTAINQYFKEKNIQFEEVH
Newman SEIQGNTVCYMWLRFNMDQQFEDTAINQYFKEKNIQFEEVH
USA300_FPR3757 SEIQGNTVCYMWLRFNMDQQFEDTAINQYFKEKNIQFEEVH
****************:****:*******************