PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002307000
• symbol^?: rplK
• synonym:
• description^?: 50S ribosomal protein L11

  descriptions from strain specific annotations:

  • 50S ribosomal protein L11
  • 50S ribosomalprotein L11p (L12e)
• strand^?: +
• coordinates^?: 2824173..2824604
• synteny block^?: BlockID0016060
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0583 (rplK)
N315:
SA0495 (rplK)
NCTC8325:
SAOUHSC_00518 (rplK)
Newman:
NWMN_0499 (rplK)
USA300_FPR3757:
SAUSA300_0522 (rplK)
04-02981:
SA2981_0514 (rplK)
08BA02176:
C248_0612 (rplK)
11819-97:
MS7_0527 (rplK)
6850:
RSAU_000489 (rplK)
71193:
ST398NM01_0612
ECT-R 2:
ECTR2_491 (rplK)
ED133:
SAOV_0572
ED98:
SAAV_0499 (rplK)
HO 5096 0412:
SAEMRSA15_04640 (rplK)
JH1:
SaurJH1_0574 (rplK)
JH9:
SaurJH9_0560 (rplK)
JKD6008:
SAA6008_00543 (rplK)
JKD6159:
SAA6159_00490 (rplK)
LGA251:
SARLGA251_04730 (rplK)
M013:
M013TW_0522
MRSA252:
SAR0542 (rplK)
MSHR1132:
SAMSHR1132_04810
MSSA476:
SAS0495 (rplK)
Mu3:
SAHV_0535 (rplK)
Mu50:
SAV0537 (rplK)
MW2:
MW0492 (rplK)
RF122:
SAB0488 (rplK)
ST398:
SAPIG0612 (rplK)
T0131:
SAT0131_00589 (bsaB)
TCH60:
HMPREF0772_12652 (rplK)
TW20:
SATW20_06070 (rplK)
USA300_TCH1516:
USA300HOU_0531 (rplK)
VC40:
SAVC_02275 (rplK)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MHIVAKKVDKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQDQAGLIIPVE
  N315            ---MAKKVDKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQDQAGLIIPVE
  NCTC8325        ---MAKKVDKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQDQAGLIIPVE
  Newman          MHIVAKKVDKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQDQAGLIIPVE
  USA300_FPR3757  ---MAKKVDKVVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNARTQDQAGLIIPVE
                     :********************************************************
  
  COL             ISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVATVTKNQVREIANSKMQDLN
  N315            ISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVATVTKDQVREIANSKMQDLN
  NCTC8325        ISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVATVTKDQVREIANSKMQDLN
  Newman          ISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVATVTKNQVREIANSKMQDLN
  USA300_FPR3757  ISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVATVTKDQVREIANSKMQDLN
                  *********************************************:**************
  
  COL             AADEEAAMRIIEGTARSMGIVVE
  N315            AADEEAAMRIIEGTARSMGIVVE
  NCTC8325        AADEEAAMRIIEGTARSMGIVVE
  Newman          AADEEAAMRIIEGTARSMGIVVE
  USA300_FPR3757  AADEEAAMRIIEGTARSMGIVVE
                  ***********************