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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002312000
- symbol?: rsmC
- synonym:
- description?: methyltransferase
- methyltransferase
- class I SAM-dependent methyltransferase
- methyltransferase small subunit
- S-adenosylmethionine-dependent methyltransferase, small subunit, putative
- 16S rRNA m(2)G 1207 methyltransferase
- methyltransferase domain protein
- methyltransferase small domain-containing protein
- methyltransferase small domain superfamily
- putative methyltransferase
- ribosomal RNA small subunit methyltransferase C
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2826879..2827197
- synteny block?: BlockID0016110
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0518
08BA02176:
C248_0616
11819-97:
MS7_0531
6850:
RSAU_000493
71193:
ST398NM01_0616
ECT-R 2:
ECTR2_495
ED133:
SAOV_0576
ED98:
SAAV_0504
HO 5096 0412:
SAEMRSA15_04680
JH1:
SaurJH1_0578
JH9:
SaurJH9_0564
JKD6008:
SAA6008_00547
JKD6159:
SAA6159_00494
LGA251:
SARLGA251_04770
M013:
M013TW_0527
MRSA252:
SAR0546
MSHR1132:
SAMSHR1132_04850
MSSA476:
SAS0499
Mu3:
SAHV_0539
Mu50:
SAV0541
MW2:
MW0496
RF122:
SAB0492
ST398:
SAPIG0616
T0131:
SAT0131_00594 (lukE)
TCH60:
HMPREF0772_12648
TW20:
SATW20_06110
USA300_TCH1516:
USA300HOU_0535
VC40:
SAVC_02295
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSHYYDEDPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYGSDVLVQTFLKAHPPGP
N315 MSHYYDEDPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYGSDVLVQTFLKAHPPGP
NCTC8325 MSHYYDEDPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYGSDVLVQTFLKAHPPGP
Newman MSHYYDEDPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYGSDVLVQTFLKAHPPGP
USA300_FPR3757 MSHYYDEDPSVISNEQRIQYQLNHHKIDLITDNGVFSKDKVDYGSDVLVQTFLKAHPPGP
************************************************************
COL SKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEKNKKLNGIDNVIVKESDAL
N315 SKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEKNKKLNGIDNVIVKESDAL
NCTC8325 SKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEKNKKLNGIDNVIVKESDAL
Newman SKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEKNKKLNGIDNVIVKESDAL
USA300_FPR3757 SKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVEKNKKLNGIDNVIVKESDAL
************************************************************
COL SAVEDKSFDFILTNPPIRAGKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNE
N315 SAVEDKSFDFILTNPPIRAGKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNE
NCTC8325 SAVEDKSFDFILTNPPIRAGKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNE
Newman SAVEDKSFDFILTNPPIRAGKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNE
USA300_FPR3757 SAVEDKSFDFILTNPPIRAGKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNE
************************************************************
COL LFGNVEVVNKDKGYYILRSIKA
N315 LFGNVEVVNKDKGYYILRSIKA
NCTC8325 LFGNVEVVNKDKGYYILRSIKA
Newman LFGNVEVVNKDKGYYILRSIKA
USA300_FPR3757 LFGNVEVVNKDKGYYILRSIKA
**********************