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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002511000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- M50 family metallopeptidase
- membrane spanning protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3024040..3024792
- synteny block?: BlockID0017470
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0611
08BA02176:
C248_0717
11819-97:
MS7_0686
6850:
RSAU_000591
71193:
ST398NM01_0714
ECT-R 2:
ECTR2_587
ED133:
SAOV_0670c
ED98:
SAAV_0598
HO 5096 0412:
SAEMRSA15_05610
JH1:
SaurJH1_0673
JH9:
SaurJH9_0658
JKD6008:
SAA6008_00652
JKD6159:
SAA6159_00590
LGA251:
SARLGA251_05690
M013:
M013TW_0623
MRSA252:
SAR0645
MSHR1132:
SAMSHR1132_05810
MSSA476:
SAS0601
Mu3:
SAHV_0632
Mu50:
SAV0635
MW2:
MW0597
RF122:
SAB0585c
ST398:
SAPIG0714
T0131:
SAT0131_00704
TCH60:
HMPREF0772_12552
TW20:
SATW20_07100
USA300_TCH1516:
USA300HOU_0655
VC40:
SAVC_02810
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ----MNYLSNFFNTTIQLNIYIIVIVAACYIAIHQYRHKPVLNYLDVILNYIPVLTHEFG
N315 ----MNYLSNFFNTTIQLNIYIIVIVAACYIAIHQYRHKPVLNYLDVILNYIPVLTHEFG
NCTC8325 ----MNYLSNFFNTTIQLNIYIIVIVAACYIAIHQYRHKPVLNYLDVILNYIPVLTHEFG
Newman MRLTMNYLSNFFNTTIQLNIYIIVIVAACYIAIHQYRHKPVLNYLDVILNYIPVLTHEFG
USA300_FPR3757 ----MNYLSNFFNTTIQLNIYIIVIVAACYIAIHQYRHKPVLNYLDVILNYIPVLTHEFG
********************************************************
COL HVLFNKLAGGRAKDLVIVTSPRERQQTLQQGFAITQSRHLAGQWLTTIGGYFMPPIMLLI
N315 HVLFNKLAGGRAKDLVIVTSPRERQQTLQQGFAITQSRHLAGQWLTTIGGYLMPPIMLLI
NCTC8325 HVLFNKLAGGRAKDLVIVTSPRERQQTLQQGFAITQSRHLAGQWLTTIGGYFMPPIMLLI
Newman HVLFNKLAGGRAKDLVIVTSPRERQQTLQQGFAITQSRHLAGQWLTTIGGYFMPPIMLLI
USA300_FPR3757 HVLFNKLAGGRAKDLVIVTSPRERQQTLQQGFAITQSRHLAGQWLTTIGGYFMPPIMLLI
***************************************************:********
COL GLASSHYQIPSFFIFTYLLIFIYFLILTSRKGSPIVVITLISIMLYFILKDENIVEIQLL
N315 GLASSHYQIPSFFIFTYLLIFIYFLILTSRKGSPIVVITLISIMLYFILKDENIVEIQLL
NCTC8325 GLASSHYQIPSFFIFTYLLIFIYFLILTSRKGSPIVVITLISIMLYFILKDENIVEIQLL
Newman GLASSHYQIPSFFIFTYLLIFIYFLILTSRKGSPIVVITLISIMLYFILKDENIVEIQLL
USA300_FPR3757 GLASSHYQIPSFFIFTYLLIFIYFLILTSRKGSPIVVITLISIMLYFILKDENIVEIQLL
************************************************************
COL VTMSYQYILGVLLGEVLQSSWTIAKLTFQRPSPQWDGSALKELSHVPIFIYSTIWIIFNL
N315 VTMSYQYILGVLLGEVLQSSWTIAKLTFQRPSPQWDGSALKELSHVPIFIYSTIWIIFNL
NCTC8325 VTMSYQYILGVLLGEVLQSSWTIAKLTFQRPSPQWDGSALKELSHVPIFIYSTIWIIFNL
Newman VTMSYQYILGII-----------------RRS-------------------STI------
USA300_FPR3757 VTMSYQYILGVLLGEVLQSSWTIAKLTFQRPSPQWDGSALKELSHVPIFIYSTIWIIFNL
**********:: * * ***
COL YAVNILLKYTHLIN
N315 YAVNILLKYTHLIN
NCTC8325 YAVNILLKYTHLIN
Newman --------------
USA300_FPR3757 YAVNILLKYTHLIN