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Summary[edit | edit source]

  • pan ID?: SAUPAN002531000
  • symbol?:
  • synonym:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 3043094..3043591
  • synteny block?: BlockID0017670
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0629
    08BA02176:
    C248_0736
    11819-97:
    MS7_0703
    6850:
    RSAU_000629
    71193:
    ST398NM01_0731
    ECT-R 2:
    ECTR2_604
    ED133:
    SAOV_0687
    ED98:
    SAAV_0615
    HO 5096 0412:
    SAEMRSA15_05790
    JH1:
    SaurJH1_0691
    JH9:
    SaurJH9_0676
    JKD6008:
    SAA6008_00669
    JKD6159:
    SAA6159_00607
    LGA251:
    SARLGA251_05860
    M013:
    M013TW_0640
    MRSA252:
    SAR0663
    MSHR1132:
    SAMSHR1132_05990
    MSSA476:
    SAS0618
    Mu3:
    SAHV_0650
    Mu50:
    SAV0653
    MW2:
    MW0615
    RF122:
    SAB0602
    ST398:
    SAPIG0731
    T0131:
    SAT0131_00723
    TCH60:
    HMPREF0772_12535
    TW20:
    SATW20_07280
    USA300_TCH1516:
    USA300HOU_0674
    VC40:
    SAVC_02895

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MQHLIKKHVLNGEFDLVRQLMSETDFMEFEEAYISSAHEVESMMFYTCILDMIKYEESSE
    N315            MQHLIKKHVLNGEFDLVRQLMSETDFMEFEEAYISSAHEVESMMFYTCILDMIKYEESSE
    NCTC8325        MQHLIKKHVLNGEFDLVRQLMSETDFMEFEEAYISSAHEVESMMFYTCILDMIKYEESSE
    Newman          MQHLIKKHVLNGEFDLVRQLMSETDFMEFEEAYISSAHEVESMMFYTCILDMIKYEESSE
    USA300_FPR3757  MQHLIKKHVLNGEFDLVRQLMSETDFMEFEEAYISSAHEVESMMFYTCILDMIKYEESSE
                    ************************************************************

    COL             MHDLAFLLLVYPLSEYEGALDSAYYHADASIKLTDGKEVKSLLQMLLLHAIPTPVISDKK
    N315            MHDLAFLLLVYPLSEYEGALDSAYYHADASIKLTDGKEVKSLLQMLLLHAIPTPVISDKK
    NCTC8325        MHDLAFLLLVYPLSEYEGALDSAYYHADASIKLTDGKEVKSLLQMLLLHAIPTPVISDKK
    Newman          MHDLAFLLLVYPLSEYEGALDSAYYHADASIKLTDGKEVKSLLQMLLLHAIPTPVISDKK
    USA300_FPR3757  MHDLAFLLLVYPLSEYEGALDSAYYHADASIKLTDGKEVKSLLQMLLLHAIPTPVISDKK
                    ************************************************************

    COL             AFDIAKQILKLDPNNNVARNVLKDTAKRMDNVVVDINELHQRNAR
    N315            AFDIAKQILKLDPNNNVARNVLKDTAKRMDNVVVDINELHQRNAR
    NCTC8325        AFDIAKQILKLDPNNNVARNVLKDTAKRMDNVVVDINELHQRNAR
    Newman          AFDIAKQILKLDPNNNVARNVLKDTAKRMDNVVVDINELHQRNAR
    USA300_FPR3757  AFDIAKQILKLDPNNNVARNVLKDTAKRMDNVVVDINELHQRNAR
                    *********************************************