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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002559000
- symbol?: —
- synonym:
- description?: membrane spanning protein
- strand?: -
- coordinates?: 3072726..3073415
- synteny block?: BlockID0017950
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0652
08BA02176:
C248_0760
11819-97:
MS7_0727
6850:
RSAU_000651
71193:
ST398NM01_0753
ECT-R 2:
ECTR2_627
ED133:
SAOV_0710c
ED98:
SAAV_0638
HO 5096 0412:
SAEMRSA15_06010
JH1:
SaurJH1_0715
JH9:
SaurJH9_0699
JKD6008:
SAA6008_00692
JKD6159:
SAA6159_00630
LGA251:
SARLGA251_06080
M013:
M013TW_0662
MRSA252:
SAR0728
MSHR1132:
SAMSHR1132_06210
MSSA476:
SAS0640
Mu3:
SAHV_0672
Mu50:
SAV0675
MW2:
MW0637
RF122:
SAB0624c
ST398:
SAPIG0753
T0131:
SAT0131_00746
TCH60:
HMPREF0772_12512
TW20:
SATW20_07500
USA300_TCH1516:
USA300HOU_0698
VC40:
SAVC_03005
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKSTAQLTKENNVKSLRLSNTDREIFENYMTYMRSDFRVNPHDTELIINRILKQLLSAEQ
N315 MKSTAQLTKENNVKSLRLSNTDREIFENYMTYMRSDFRVNPHDTELIINRILKQLLSAEQ
NCTC8325 MKSTAQLTKENNVKSLRLSNTDREIFENYMTYMRSDFRVNPHDTELIINRILKQLLSAEQ
Newman MKSTAQLTKENNVKSLRLSNTDREIFENYMTYMRSDFRVNPHDTELIINRILKQLLSAEQ
USA300_FPR3757 MKSTAQLTKENNVKSLRLSNTDREIFENYMTYMRSDFRVNPHDTELIINRILKQLLSAEQ
************************************************************
COL HGLLALDFFNHDPKAHAIKELKAMPNETFKNIFKYIYQHIVLLIGIVSFLKGFLGFFMEK
N315 HGLLALDFFNHDPKAHAIKELKAMPNETFKNIFKYIYQHIVLLIGIVSFLKGFLGFFMEK
NCTC8325 HGLLALDFFNHDPKAHAIKELKAMPNETFKNIFKYIYQHIVLLIGIVSFLKGFLGFFMEK
Newman HGLLALDFFNHDPKAHAIKELKAMPNETFKNIFKYIYQHIVLLIGIVSFLKGFLGFFMEK
USA300_FPR3757 HGLLALDFFNHDPKAHAIKELKAMPNETFKNIFKYIYQHIVLLIGIVSFLKGFLGFFMEK
************************************************************
COL NGSNLYFVSFPFSVVVGFFIVFLFIWFSFKTIQLQCFNNSNWIWIFTYLAIILLIVGFFY
N315 NGSNLYFVSFPFSVVVGFFIVFLFIWFSFKTIQLQCFNNSNWIWIFTYLAIILLIVGFFY
NCTC8325 NGSNLYFVSFPFSVVVGFFIVFLFIWFSFKTIQLQCFNNSNWIWIFTYLAIILLIVGFFY
Newman NGSNLYFVSFPFSVVVGFFIVFLFIWFSFKTIQLQCFNNSNWIWIFTYLAIILLIVGFFY
USA300_FPR3757 NGSNLYFVSFPFSVVVGFFIVFLFIWFSFKTIQLQCFNNSNWIWIFTYLAIILLIVGFFY
************************************************************
COL VFFIPQSLLAFGPYIQVSNWVFIIFSFIVMPIGLRIERNISKKHSHTFL
N315 VFFIPQSLLAFGPYIQVSNWVFIIFSFIVMPIGLRIERNISKKHSHTFL
NCTC8325 VFFIPQSLLAFGPYIQVSNWVFIIFSFIVMPIGLRIERNISKKHSHTFL
Newman VFFIPQSLLAFGPYIQVSNWVFIIFSFIVMPIGLRIERNISKKHSHTFL
USA300_FPR3757 VFFIPQSLLAFGPYIQVSNWVFIIFSFIVMPIGLRIERNISKKHSHTFL
*************************************************