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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002564000
- symbol?: —
- synonym:
- description?: Rossman fold protein, TIGR00730 family
- Rossman fold protein, TIGR00730 family
- lysine decarboxylase family protein
- TIGR00730 family Rossman fold protein
- LOG family protein yvdD
- Lysine decarboxylase family
- putative lysine decarboxylase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3075859..3076425
- synteny block?: BlockID0018000
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0657
08BA02176:
C248_0765
11819-97:
MS7_0732 (yvdD)
6850:
RSAU_000656
71193:
ST398NM01_0758
ECT-R 2:
ECTR2_632
ED133:
SAOV_0715c
ED98:
SAAV_0643
HO 5096 0412:
SAEMRSA15_06060
JH1:
SaurJH1_0720
JH9:
SaurJH9_0704
JKD6008:
SAA6008_00697
JKD6159:
SAA6159_00635
LGA251:
SARLGA251_06130
M013:
M013TW_0667
MRSA252:
SAR0733
MSHR1132:
SAMSHR1132_06260
MSSA476:
SAS0645
Mu3:
SAHV_0677
Mu50:
SAV0680
MW2:
MW0642
RF122:
SAB0629c
ST398:
SAPIG0758
T0131:
SAT0131_00751
TCH60:
HMPREF0772_12507
TW20:
SATW20_07550
USA300_TCH1516:
USA300HOU_0703
VC40:
SAVC_03030
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKRIAVYCGASKGHDPSYVQKAYDLGKYFAEQGYELVFGAGSIGIMGAIQDGVLDHGGKA
N315 MKRIAVYCGASKGHDPSYVQKAYDLGKYFAEQGYELVFGAGSIGIMGAIQDGVLNHGGKA
NCTC8325 MKRIAVYCGASKGHDPSYVQKAYDLGKYFAEQGYELVFGAGSIGIMGAIQDGVLDHGGKA
Newman MKRIAVYCGASKGHDPSYVQKAYDLGKYFAEQGYELVFGAGSIGIMGAIQDGVLDHGGKA
USA300_FPR3757 MKRIAVYCGASKGHDPSYVQKAYDLGKYFAEQGYELVFGAGSIGIMGAIQDGVLDHGGKA
******************************************************:*****
COL IGVMPKMLDEHEITSQRLTELILVDSMHERKNKMAELADAFVMAPGGAGSLEEFFEMYSW
N315 IGVMPKMLDEHEITSQRLTELILVDSMHERKNKMAELADAFVMAPGGAGSLEEFFEMYSW
NCTC8325 IGVMPKMLDEHEITSQRLTELILVDSMHERKNKMAELADAFVMAPGGAGSLEEFFEMYSW
Newman IGVMPKMLDEHEITSQRLTELILVDSMHERKNKMAELADAFVMAPGGAGSLEEFFEMYSW
USA300_FPR3757 IGVMPKMLDEHEITSQRLTELILVDSMHERKNKMAELADAFVMAPGGAGSLEEFFEMYSW
************************************************************
COL AQIGIHEKPIAIYNINGFFNPLQTMIDHMIEEGFIDPKYRALAPLCDTKESLIESILNFK
N315 AQIGIHEKPIAIYNINGFFNPLQTMIDHMIEEGFIDPKYRALAPLCDTKESLIESILNFK
NCTC8325 AQIGIHEKPIAIYNINGFFNPLQTMIDHMIEEGFIDPKYRALAPLCDTKESLIESILNFK
Newman AQIGIHEKPIAIYNINGFFNPLQTMIDHMIEEGFIDPKYRALAPLCDTKESLIESILNFK
USA300_FPR3757 AQIGIHEKPIAIYNINGFFNPLQTMIDHMIEEGFIDPKYRALAPLCDTKESLIESILNFK
************************************************************
COL PLGTRSYD
N315 PLGTRSYD
NCTC8325 PLGTRSYD
Newman PLGTRSYD
USA300_FPR3757 PLGTRSYD
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