PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003070000
• symbol^?: pgi
• synonym:
• description^?: glucose-6-phosphate isomerase

  descriptions from strain specific annotations:

  • glucose-6-phosphate isomerase
  • glucose-6-phosphate isomerase A (GPI A) (Phosphoglucoseisomerase A) (PGI-A) (Phosphohexose isomerase A) (PHI-A)
  • putative glucose-6-phosphate isomerase
• strand^?: +
• coordinates^?: 3456662..3457993
• synteny block^?: BlockID0021780
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0966 (pgi)
N315:
SA0823 (pgi)
NCTC8325:
SAOUHSC_00900 (pgi)
Newman:
NWMN_0833 (pgi)
USA300_FPR3757:
SAUSA300_0865 (pgi)
04-02981:
SA2981_0917 (pgi)
08BA02176:
C248_0963
11819-97:
MS7_0917 (pgi)
6850:
RSAU_000839 (pgi)
71193:
ST398NM01_0945
ECT-R 2:
ECTR2_818
ED133:
SAOV_0908
ED98:
SAAV_0923 (pgi)
HO 5096 0412:
SAEMRSA15_07920
JH1:
SaurJH1_0981 (pgi)
JH9:
SaurJH9_0962 (pgi)
JKD6008:
SAA6008_00915 (pgi)
JKD6159:
SAA6159_00821 (pgi)
LGA251:
SARLGA251_08800
M013:
M013TW_0881
MRSA252:
SAR0924 (pgi)
MSHR1132:
SAMSHR1132_08140
MSSA476:
SAS0832 (pgi)
Mu3:
SAHV_0957 (pgi)
Mu50:
SAV0962 (pgi)
MW2:
MW0844 (pgi)
RF122:
SAB0830 (pgi)
ST398:
SAPIG0945 (pgi)
T0131:
SAT0131_00995 (thiM)
TCH60:
HMPREF0772_12284 (pgi)
TW20:
SATW20_09620
USA300_TCH1516:
USA300HOU_0921 (pgi)
VC40:
SAVC_03985 (pgi)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDFLGWVDLPVDYDKEEFS
  N315            MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDFLGWVDLPVDYDKEEFS
  NCTC8325        MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDFLGWIDLPVDYDKEEFS
  Newman          MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDFLGWVDLPVDYDKEEFS
  USA300_FPR3757  MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDFLGWVDLPVDYDKEEFS
                  ***********************************************:************
  
  COL             RIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYT
  N315            RIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYT
  NCTC8325        RIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYT
  Newman          RIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYT
  USA300_FPR3757  RIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYT
                  ************************************************************
  
  COL             KELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGA
  N315            KELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGA
  NCTC8325        KELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGA
  Newman          KELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGA
  USA300_FPR3757  KELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGA
                  ************************************************************
  
  COL             LKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAGINIEAMMIGAAKAREELSSDKL
  N315            LKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAGINIEAMMIGAAKAREELSSDKL
  NCTC8325        LKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAGINIEAMMIGAAKAREELSSDKL
  Newman          LKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAGINIEAMMIGAAKAREELSSDKL
  USA300_FPR3757  LKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAGINIEAMMIGAAKAREELSSDKL
                  ************************************************************
  
  COL             EENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSAN
  N315            EDNIAYQYATIRNILYAKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSAN
  NCTC8325        EENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSAN
  Newman          EENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSAN
  USA300_FPR3757  EENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSAN
                  *:**********************************************************
  
  COL             YTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDSDDLDGLNYLAGKTIDEVNTKA
  N315            YTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDSDDLDGLNYLAGKTIDEVNTKA
  NCTC8325        YTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDSDDLDGLNYLAGKTIDEVNTKA
  Newman          YTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDSDDLDGLNYLAGKTIDEVNTKA
  USA300_FPR3757  YTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDSDDLDGLNYLAGKTIDEVNTKA
                  ************************************************************
  
  COL             FEGTLLAHTDGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYK
  N315            FEGTLLAHTDGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYK
  NCTC8325        FEGTLLAHTDGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYK
  Newman          FEGTLLAHTDGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYK
  USA300_FPR3757  FEGTLLAHTDGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYK
                  ************************************************************
  
  COL             QNMFALLGKPGFEDLKKELEERL
  N315            QNMFALLGKPGFEDLKKELEERL
  NCTC8325        QNMFALLGKPGFEDLKKELEERL
  Newman          QNMFALLGKPGFEDLKKELEERL
  USA300_FPR3757  QNMFALLGKPGFEDLKKELEERL
                  ***********************