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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003819000
- symbol?: —
- synonym:
- description?: DUF1033 family protein
- DUF1033 family protein
- DNA binding protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4108969..4109277
- synteny block?: BlockID0028760
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1357
08BA02176:
C248_1443
11819-97:
MS7_1359
6850:
RSAU_001283
71193:
ST398NM01_1405
ECT-R 2:
ECTR2_1260
ED133:
SAOV_1413c
ED98:
SAAV_1387
HO 5096 0412:
SAEMRSA15_12660
JH1:
SaurJH1_1493
JH9:
SaurJH9_1464
JKD6008:
SAA6008_01367
JKD6159:
SAA6159_01270
LGA251:
SARLGA251_13200
M013:
M013TW_1348
MRSA252:
SAR1415
MSHR1132:
SAMSHR1132_12440
MSSA476:
SAS1344
Mu3:
SAHV_1391
Mu50:
SAV1403
MW2:
MW1291
RF122:
SAB1259c
ST398:
SAPIG1405
T0131:
SAT0131_01478
TCH60:
HMPREF0772_11806
TW20:
SATW20_14020
USA300_TCH1516:
—
VC40:
SAVC_06260
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MWTVTKIRADYEGWWLFSDWPENIVEKYQYQDFDDMFKHYQQLINQCKVQFDNYVTGKYN
N315 MWTVTKIRADYEGWWLFSDWPENIVEKYQYQDFDDMFKHYQQLINQCKVQFDNYVTGKYN
NCTC8325 MWTVTKIRADYEGWWLFSDWPENIVEKYQYQDFDDMFKHYQQLINQCKVQFDNYVTGKYN
Newman MWTVTKIRADYEGWWLFSDWPENIVEKYQYQDFDDMFKHYQQLINQCKVQFDNYVTGKYN
USA300_FPR3757 MWTVTKIRADYEGWWLFSDWPENIVEKYQYQDFDDMFKHYQQLINQCKVQFDNYVTGKYN
************************************************************
COL IYAFYNNCDMNYCEDCEEDLQIFYSFIVLQNNEVYYKLPIID
N315 IYAFYNNCDMNYCEDCEEDLQIFYSFIVLQNNEVYYKLPIID
NCTC8325 IYAFYNNCDMNYCEDCEEDLQIFYSFIVLQNNEVYYKLPIID
Newman IYAFYNNCDMNYCEDCEEDLQIFYSFIVLQNNEVYYKLPIID
USA300_FPR3757 IYAFYNNCDMNYCEDCEEDLQIFYSFIVLQNNEVYYKLPIID
******************************************