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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN003903000
  • symbol?:
  • synonym:
  • description?: hypothetical protein
  • strand?: -
  • coordinates?: 4224665..4224781
  • synteny block?: BlockID0029490
  • occurrence?: in 55% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1400
    08BA02176:
    C248_1484
    11819-97:
    MS7_1401
    6850:
    71193:
    ST398NM01_1444
    ECT-R 2:
    ECTR2_1299
    ED133:
    ED98:
    SAAV_1430
    HO 5096 0412:
    JH1:
    JH9:
    JKD6008:
    SAA6008_01413
    JKD6159:
    SAA6159_01310
    LGA251:
    M013:
    M013TW_1392
    MRSA252:
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_1433
    Mu50:
    SAV1445
    MW2:
    MW1334
    RF122:
    ST398:
    SAPIG1444
    T0131:
    SAT0131_01533
    TCH60:
    TW20:
    USA300_TCH1516:
    USA300HOU_1382
    VC40:
    SAVC_06480

Genome Viewer[edit | edit source]

N315
Newman

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    N315            MLTQSEMIVVFVLDETINQGINLTAMKYPKSFDMDRVI
    Newman          MLTQSEMIVVFVLDETINQGINLTAMKYPKSFDMDRVI
                    **************************************