PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004116000
• symbol^?: aroK
• synonym:
• description^?: shikimate kinase

  descriptions from strain specific annotations:

  • shikimate kinase
  • shikimate kinase, putative
  • putative shikimate kinase
  • shikimate kinase, AroK
  • Shikimate kinase I
• strand^?: -
• coordinates^?: 4391667..4392191
• synteny block^?: BlockID0031460
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1596 (aroK)
N315:
SA1368
NCTC8325:
SAOUHSC_01635
Newman:
NWMN_1442
USA300_FPR3757:
SAUSA300_1499 (aroK)
04-02981:
SA2981_1496 (aroE)
08BA02176:
C248_1580
11819-97:
MS7_1555
6850:
RSAU_001404 (aroK)
71193:
ST398NM01_1603
ECT-R 2:
ECTR2_1389
ED133:
SAOV_1538
ED98:
SAAV_1531 (aroK)
HO 5096 0412:
SAEMRSA15_14580
JH1:
SaurJH1_1629
JH9:
SaurJH9_1596
JKD6008:
SAA6008_01507 (aroK)
JKD6159:
SAA6159_01473 (aroK)
LGA251:
SARLGA251_14440
M013:
M013TW_1553
MRSA252:
SAR1615
MSHR1132:
SAMSHR1132_13780
MSSA476:
SAS1476
Mu3:
SAHV_1525
Mu50:
SAV1538
MW2:
MW1490
RF122:
SAB1410c
ST398:
SAPIG1603 (aroK)
T0131:
SAT0131_01631 (tmk)
TCH60:
HMPREF0772_11603 (aroK)
TW20:
SATW20_15340
USA300_TCH1516:
USA300HOU_1539 (aroK)
VC40:
SAVC_06935

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNHDKSPIILIGFMGTGKSTIGKYVADEQNLSFIDIDSYIEEKYKLTIPEIFCKHGEQYF
  N315            MNHDKSPIILIGFMGTGKSTIGKYVADEQNLSFIDIDSYIEEKYKLTIPEIFSKHGEQYF
  NCTC8325        MNHDKSPIILIGFMGTGKSTIGKYVADEQNLSFIDIDSYIEEKYKLTIPEIFCKHGEQYF
  Newman          MNHDKSPIILIGFMGTGKSTIGKYVADEQNLSFIDIDSYIEEKYKLTIPEIFCKHGEQYF
  USA300_FPR3757  MNHDKSPIILIGFMGTGKSTIGKYVADEQNLSFIDIDSYIEEKYKLTIPEIFCKHGEQYF
                  ****************************************************.*******
  
  COL             RNLEFTCLQECINTADIIATGGGIIESEEAFNFLKNQKNIIWLDCNIDIIYSRINDDPHR
  N315            RNLEFTCLQECINTADIIATGGGIIESEEAFNFLKNQKNIIWLDCNIDIIYSRINDDPHR
  NCTC8325        RNLEFTCLQECINTADIIATGGGIIESEEAFNFLKNQKNIIWLDCNIDIIYSRINDDPHR
  Newman          RNLEFTCLQECINTADIIATGGGIIESEEAFNFLKNQKNIIWLDCNIDIIYSRINDDPHR
  USA300_FPR3757  RNLEFTCLQECINTADIIATGGGIIESEEAFNFLKNQKNIIWLDCNIDIIYSRINDDPHR
                  ************************************************************
  
  COL             PNANNKTIKQLNDLYCSRNLRYNEIAFKKFDSHLLSISEIYYELLNLIKASDQY
  N315            PNANNKTIKQLNDLYCSRILRYNEIAFKKFDSHLLSISEIYYELLNLIKASDQY
  NCTC8325        PNANNKTIKQLNDLYCSRNLRYNEIAFKKFDSHLLSISEIYYELLNLIKASDQY
  Newman          PNANNKTIKQLNDLYCSRNLRYNEIAFKKFDSHLLSISEIYYELLNLIKASDQY
  USA300_FPR3757  PNANNKTIKQLNDLYCSRNLRYNEIAFKKFDSHLLSISEIYYELLNLIKASDQY
                  ****************** ***********************************