Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004183000
- symbol?: —
- synonym:
- description?: GTP-binding protein YqeH
- GTP-binding protein YqeH
- ribosome biogenesis GTPase YqeH
- GTPase, putative
- GTPase
- GTPase family protein
- GTPase YqeH
- GTP-binding protein YqeH, possibly involved in replication initiation
- putative GTPase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4444686..4445786
- synteny block?: BlockID0032130
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1555 (yqeH)
08BA02176:
C248_1639
11819-97:
MS7_1614 (yqeH)
6850:
RSAU_001461 (yqeH)
71193:
ST398NM01_1662
ECT-R 2:
ECTR2_1446
ED133:
SAOV_1596
ED98:
SAAV_1588
HO 5096 0412:
SAEMRSA15_15160
JH1:
SaurJH1_1689
JH9:
SaurJH9_1654
JKD6008:
SAA6008_01567
JKD6159:
SAA6159_01532
LGA251:
SARLGA251_15020
M013:
M013TW_1611
MRSA252:
SAR1674
MSHR1132:
SAMSHR1132_14360
MSSA476:
SAS1534
Mu3:
SAHV_1584
Mu50:
SAV1597
MW2:
MW1548
RF122:
SAB1469c
ST398:
SAPIG1662
T0131:
SAT0131_01693
TCH60:
HMPREF0772_11544 (yqeH)
TW20:
SATW20_15930
USA300_TCH1516:
USA300HOU_1598
VC40:
SAVC_07240
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSDILKCIGCGAPLQSEDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLESEDFL
N315 MSDILKCIGCGAPLQSEDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLESEDFL
NCTC8325 MSDILKCIGCGAPLQSEDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLESEDFL
Newman MSDILKCIGCGAPLQSEDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLESEDFL
USA300_FPR3757 MSDILKCIGCGAPLQSEDKNKPGFVPEHNMFRDDVICRRCFRLKNYNEVQDVGLESEDFL
************************************************************
COL KLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILAANKLDLLPKQINKRRVKE
N315 KLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILAANKLDLLPKQINKRRVKE
NCTC8325 KLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILAANKLDLLPKQINKRRVKE
Newman KLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILAANKLDLLPKQINKRRVKE
USA300_FPR3757 KLLSGLADKKGIVVNVVDVFDFEGSFINAVKRIVGNKKIILAANKLDLLPKQINKRRVKE
************************************************************
COL WLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKL
N315 WLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKL
NCTC8325 WLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKL
Newman WLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKL
USA300_FPR3757 WLKRTARKYGLEADDVVLISAEKGWGIDDLLSSIANIRENEDVYIVGTTNVGKSTLINKL
************************************************************
COL IEASVGEKDVVTTSRFPGTTLDMIDIPLDETSFMYDTPGIIQDHQMTHLVSEKELKIIMP
N315 IEASVGEKDVVTTSRFPGTTLDMIDIPLDESSFMYDTPGIIQDHQMTHLVSEKELKIIMP
NCTC8325 IEASVGEKDVVTTSRFPGTTLDMIDIPLDETSFMYDTPGIIQDHQMTHLVSEKELKIIMP
Newman IEASVGEKDVVTTSRFPGTTLDMIDIPLDETSFMYDTPGIIQDHQMTHLVSEKELKIIMP
USA300_FPR3757 IEASVGEKDVVTTSRFPGTTLDMIDIPLDETSFMYDTPGIIQDHQMTHLVSEKELKIIMP
******************************:*****************************
COL KKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPLVCFFSNDLNIHRTKTEKANDLWRNQ
N315 KKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPLVCFFSNDLNIHRTKTEKANDLWRNQ
NCTC8325 KKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPLVCFFSNDLNIHRTKTEKANDLWRNQ
Newman KKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPLVCFFSNDLNIHRTKTEKANDLWRNQ
USA300_FPR3757 KKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPLVCFFSNDLNIHRTKTEKANDLWRNQ
************************************************************
COL LGDLLTPPGNPQNFDLNEVKAVRLETGKEKRDVMISGLGFITIGPGAKVIVRVPKNVDVV
N315 LGDLLTPPGNPQNFDLNELKAVRLETGKEKRDVMISGLGFITIGPGAKVIVRVPKNVDVV
NCTC8325 LGDLLTPPGNPQNFDLNEVKAVRLETGKEKRDVMISGLGFITIGPGAKVIVRVPKNVDVV
Newman LGDLLTPPGNPQNFDLNEVKAVRLETGKEKRDVMISGLGFITIGPGAKVIVRVPKNVDVV
USA300_FPR3757 LGDLLTPPGNPQNFDLNEVKAVRLETGKEKRDVMISGLGFITIGPGAKVIVRVPKNVDVV
******************:*****************************************
COL LRNSIL
N315 LRNSIL
NCTC8325 LRNSIL
Newman LRNSIL
USA300_FPR3757 LRNSIL
******