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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004303000
- symbol?: thrS
- synonym:
- description?: threonyl-tRNA synthetase
- threonyl-tRNA synthetase
- threonine--tRNA ligase
- threonyl-tRNA synthetase 1
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4542736..4544673
- synteny block?: BlockID0033270
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1642 (thrS)
08BA02176:
C248_1724 (thrS)
11819-97:
MS7_1690 (thrS)
6850:
RSAU_001541 (thrS)
71193:
ST398NM01_1737
ECT-R 2:
ECTR2_1523 (thrS)
ED133:
SAOV_1671 (thrS)
ED98:
SAAV_1672 (thrS)
HO 5096 0412:
SAEMRSA15_15930 (thrS)
JH1:
SaurJH1_1774 (thrS)
JH9:
SaurJH9_1740 (thrS)
JKD6008:
SAA6008_01650 (thrS)
JKD6159:
SAA6159_01607 (thrS)
LGA251:
SARLGA251_15750 (thrS)
M013:
M013TW_1696
MRSA252:
SAR1762 (thrS)
MSHR1132:
SAMSHR1132_15100
MSSA476:
SAS1611 (thrS)
Mu3:
SAHV_1669 (thrS)
Mu50:
SAV1683 (thrS)
MW2:
MW1626 (thrS)
RF122:
SAB1542c (thrS)
ST398:
SAPIG1737 (thrS)
T0131:
SAT0131_01785
TCH60:
HMPREF0772_11468 (thrS)
TW20:
SATW20_16730 (thrS)
USA300_TCH1516:
USA300HOU_1669 (thrS)
VC40:
SAVC_07620 (thrS)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIE
N315 MEQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIG
NCTC8325 MEQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIE
Newman MEQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIE
USA300_FPR3757 MEQINIQFPDGNKKAFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTKPLETDGSIE
***********************************************************
COL IVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFE
N315 IVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFE
NCTC8325 IVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFE
Newman IVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFE
USA300_FPR3757 IVTPGSEEALEVLRHSTAHLMAHAIKRLYGNVKFGVGPVIEGGFYYDFDIDQNISSDDFE
************************************************************
COL QIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELIDAIPEDENVTLYSQGDFTDL
N315 QIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELIDAIPEDENVTLYSQGDFTDL
NCTC8325 QIEKTMKQIVNENMKIERKVVSRDEVKELFSNDEYKLELIDAIPEDENVTLYSQGDFTDL
Newman QIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELIDAIPEDENVTLYSQGDFTDL
USA300_FPR3757 QIEKTMKQIVNENMKIERKVVSRDEAKELFSNDEYKLELIDAIPEDENVTLYSQGDFTDL
*************************.**********************************
COL CRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE
N315 CRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE
NCTC8325 CRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE
Newman CRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE
USA300_FPR3757 CRGVHVPSTAKIKEFKLLSTAGAYWRGDSNNKMLQRIYGTAFFDKKELKAHLQMLEERKE
************************************************************
COL RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN
N315 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN
NCTC8325 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN
Newman RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN
USA300_FPR3757 RDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLAN
************************************************************
COL VDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAEL
N315 VDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAEL
NCTC8325 VDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAEL
Newman VDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAEL
USA300_FPR3757 VDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAEL
************************************************************
COL GTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSF
N315 GTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSF
NCTC8325 GTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSF
Newman GTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSF
USA300_FPR3757 GTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFEDYSF
************************************************************
COL RLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAM
N315 RLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAM
NCTC8325 RLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAM
Newman RLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAM
USA300_FPR3757 RLSYRDPEDKEKYFDDDDMWNKAENMLKEAADELGLSYEEAIGEAAFYGPKLDVQVKTAM
************************************************************
COL GKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFP
N315 GKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFP
NCTC8325 GKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFP
Newman GKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFP
USA300_FPR3757 GKEETLSTAQLDFLLPERFDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEETKGAFP
************************************************************
COL TWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQ
N315 TWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQ
NCTC8325 TWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQ
Newman TWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQ
USA300_FPR3757 TWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQ
************************************************************
COL IVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRLKKHR
N315 IVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRLKKHR
NCTC8325 IVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRLKKHR
Newman IVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRLKKHR
USA300_FPR3757 IVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRLKKHR
*********************************************