PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004314000
• symbol^?: —
• synonym:
• description^?: glucosyltransferase
• strand^?: -
• coordinates^?: 4555644..4556643
• synteny block^?: BlockID0033380
• occurrence^?: in 97% of 33 strains

⊟Orthologs

COL:
SACOL1738
N315:
SA1514
NCTC8325:
SAOUHSC_01798
Newman:
NWMN_1584
USA300_FPR3757:
SAUSA300_1637
04-02981:
SA2981_1650
08BA02176:
C248_1733
11819-97:
MS7_1698
6850:
RSAU_001549
71193:
ST398NM01_1745
ECT-R 2:
ECTR2_1531
ED133:
SAOV_1679
ED98:
SAAV_1681
HO 5096 0412:
SAEMRSA15_16010
JH1:
SaurJH1_1782
JH9:
SaurJH9_1748
JKD6008:
SAA6008_01658
JKD6159:
SAA6159_01615
LGA251:
SARLGA251_15830
M013:
M013TW_1704
MRSA252:
SAR1770
MSHR1132:
—
MSSA476:
SAS1619
Mu3:
SAHV_1677
Mu50:
SAV1691
MW2:
MW1634
RF122:
SAB1550c
ST398:
SAPIG1745
T0131:
SAT0131_01793
TCH60:
HMPREF0772_11460
TW20:
SATW20_16810
USA300_TCH1516:
USA300HOU_1678
VC40:
SAVC_07660

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKTIQLHKTTLILIAILLFYTFMGILLPLMHDDLQWFSNYNTDILKVGFASLNGRYIGNI
  N315            MKTIQLHKTTLILIAILLFYTFMGILLPIMHDDLQWFSNYNTDILKVGFASLNGRYIGNI
  NCTC8325        MKTIQLHKTTLILIAILLFYTFMGILLPLMHDDLQWFSNYNTDILKVGFASLNGRYIGNI
  Newman          MKTIQLHKTTLILIAILLFYTFMGILLPLMHDDLQWFSNYNTDILKVGFASLNGRYIGNI
  USA300_FPR3757  MKTIQLHKTTLILIAILLFYTFMGILLPLMHDDLQWFSNYNTDILKVGFASLNGRYIGNI
                  ****************************:*******************************
  
  COL             FEIIAVHVSWLRWLSYGLISMGIIWMIMHITRCKAWTSYYLLAFSLMLILPSAIYADTYG
  N315            FEIIAVHVSWLRWLSYGLISMGIIWMIMHITRCKAWTSYYLLAFSLMLILPSAIYADTYG
  NCTC8325        FEIIAVHVSWLRWLSYGLISMGIIWMIMHITRCKAWTSYYLLAFSLMLILPSAIYADTYG
  Newman          FEIIAVHVSWLRWLSYGLISMGIIWMIMHITRCKAWTSYYLLAFSLMLILPSAIYADTYG
  USA300_FPR3757  FEIIAVHVSWLRWLSYGLISMGIIWMIMHITRCKAWTSYYLLAFSLMLILPSAIYADTYG
                  ************************************************************
  
  COL             WFAGFYNYATSTLISLFIIYYCINAIIYKEKQPVSVTVLFYVLCFFGQLFMENVTLFHCI
  N315            WFAGFYNYATSTLISLFIIYYCINAIIYKEKQPVSVTVLFYVLCFFGQLFMENVTLFHCI
  NCTC8325        WFAGFYNYATSTLISLFIIYYCINAIIYKEKQPVSVTVLFYVLCFFGQLFMENVTLFHCI
  Newman          WFAGFYNYATSTLISLFIIYYCINAIIYKEKQPVSVTVLFYVLCFFGQLFMENVTLFHCI
  USA300_FPR3757  WFAGFYNYATSTLISLFIIYYCINAIIYKEKQPVSVTVLFYVLCFFGQLFMENVTLFHCI
                  ************************************************************
  
  COL             ILILAFLYEFTANRTLNYKLLFSFMIATIGTIIMFSNPNYRKILFEGSEYQQVSNNQGIF
  N315            ILILAFLYEFTANRTLNYKLLFSFMIATIGTIIMFSNPNYRKILFEGSEYQQVSNNQGIF
  NCTC8325        ILILAFLYEFTANRTLNYKLLFSFMIATIGTIIMFSNPNYRKILFEGSEYQQVSNNQGIF
  Newman          ILILAFLYEFTANRTLNYKLLFSFMIATIGTIIMFSNPNYRKILFEGSEYQQVSNNQGIF
  USA300_FPR3757  ILILAFLYEFTANRTLNYKLLFSFMIATIGTIIMFSNPNYRKILFEGSEYQQVSNNQGIF
                  ************************************************************
  
  COL             SKFAEMISTSLPYGVIFSQIIILSMIAALIIYLLLRSDRYVHLTILKRRIIMIGFITLPL
  N315            SKFAEMISTSLPYGVIFSQIIILSMIAALIIYLLLRSDRYVHLTILKRRIIMIGFITLPL
  NCTC8325        SKFAEMISTSLPYGVIFSQIIILSMIAALIIYLLLRSDRYVHLTILKRRIIMIGFITLPL
  Newman          SKFAEMISTSLPYGVIFSQIIILSMIAALIIYLLLRSDRYVHLTILKRRIIMIGFITLPL
  USA300_FPR3757  SKFAEMISTSLPYGVIFSQIIILSMIAALIIYLLLRSDRYVHLTILKRRIIMIGFITLPL
                  ************************************************************
  
  COL             YYLLFYNQFLLNKNTDIGLVGFVNVIVCGYFAFSIFVGIYLSINDRKTQITLYSLLIAIC
  N315            YYLLFYNQFLLNKNTDIGLVGFVNVIVCGYFAFSIFVGIYLSINDRKTQITLYSLLIAIC
  NCTC8325        YYLLFYNQFLLNKNTDIGLVGFVNVIVCGYFAFSIFVGIYLSINDRKTQITLYSLLIAIC
  Newman          YYLLFYNQFLLNKNTDIGLVGFVNVIVCGYFAFSIFVGIYLSINDRKTQITLYSLLIAIC
  USA300_FPR3757  YYLLFYNQFLLNKNTDIGLVGFVNVIVCGYFAFSIFVGIYLSINDRKTQITLYSLLIAIC
                  ************************************************************
  
  COL             VSASTLVIVTPIEPGNFLIVYTIHVIILIILLKEFRKYKSINVNFIKGASLVLAVIYLSA
  N315            VSASTLVIVTPIEPGNFLIVYTIHVIILIILLKEFRKYKSINVNFIKGASLVLAVIYLSA
  NCTC8325        VSASTLVIVTPIEPGNFLIVYTIHVIILIILLKEFRKYKSINVNFIKGASLVLAVIYLSA
  Newman          VSASTLVIVTPIEPGNFLIVYTIHVIILIILLKEFRKYKSINVNFIKGASLVLAVIYLSA
  USA300_FPR3757  VSASTLVIVTPIEPGNFLIVYTIHVIILIILLKEFRKYKSINVNFIKGASLVLAVIYLSA
                  ************************************************************
  
  COL             FIYVHYEHEKRVQLLKQQIKDHPRQEVYTVESLPFEHYMHHPSPINKNYQEWFNNYEELP
  N315            FIYVHYEHEKRVQLLKQQIKDHPRQEVYTVESLPFEHYMHHPSPINKNYQEWFNNYEELP
  NCTC8325        FIYVHYEHEKRVQLLKQQIKDHPRQEVYTVESLPFEHYMHHPSPINKNYQEWFNNYEELP
  Newman          FIYVHYEHEKRVQLLKQQIKDHPRQEVYTVESLPFEHYMHHPSPINKNYQEWFNNYEELP
  USA300_FPR3757  FIYVHYEHEKRVQLLKQQIKDHPRQEVYTVESLPFEHYMHHPSPINKNYQEWFNNYEELP
                  ************************************************************
  
  COL             KMTKVKYIPFGSDDS
  N315            KMTKVKYIPFGSDDS
  NCTC8325        KMTKVKYIPFGSDDS
  Newman          KMTKVKYIPFGSDDS
  USA300_FPR3757  KMTKVKYIPFGSDDS
                  ***************