Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004375000
- symbol?: —
- synonym:
- description?: glycerophosphoryl diester phosphodiesterase
- glycerophosphoryl diester phosphodiesterase
- glycerophosphoryl diester phosphodiesterase, putative
- putative glycerophosphoryl diester phosphodiesterase
- glycerophosphodiester phosphodiesterase
- glycerophosphoryl diester phosphodiesterase family protein
- glycerophosphoryl diester phosphodiesterase protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4614451..4615367
- synteny block?: BlockID0033800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1679
08BA02176:
C248_1761
11819-97:
MS7_1727
6850:
RSAU_001577
71193:
ST398NM01_1773
ECT-R 2:
ECTR2_1561
ED133:
SAOV_1707
ED98:
SAAV_1731
HO 5096 0412:
SAEMRSA15_16290
JH1:
SaurJH1_1811
JH9:
SaurJH9_1776
JKD6008:
SAA6008_01689
JKD6159:
SAA6159_01644
LGA251:
SARLGA251_16110
M013:
M013TW_1733
MRSA252:
SAR1798
MSHR1132:
SAMSHR1132_15700
MSSA476:
SAS1647
Mu3:
SAHV_1707
Mu50:
SAV1721
MW2:
MW1663
RF122:
SAB1579c
ST398:
SAPIG1773
T0131:
SAT0131_01824 (tagX)
TCH60:
HMPREF0772_11432 (glpQ3)
TW20:
SATW20_17110
USA300_TCH1516:
USA300HOU_1709 (ugpQ2)
VC40:
SAVC_07810
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTLNKLKDELQIVSHRGLPSDFPENTMVGYREVMGLNVAMLEIDVHLTKDQHFVVIHDET
N315 MTLNKLKDELQIVSHRGLPSDFPENTMVGYREVMGLNVAMLEIDVHLTKDQHFVVIHDET
NCTC8325 MTLNKLKDELQIVSHRGLPSDFPENTMVGYREVMGLNVAMLEIDVHLTKDQHFVVIHDET
Newman MTLNKLKDELQIVSHRGLPSDFPENTMVGYREVMGLNVAMLEIDVHLTKDQHFVVIHDET
USA300_FPR3757 MTLNKLKDELQIVSHRGLPSDFPENTMVGYREVMGLNVAMLEIDVHLTKDQHFVVIHDET
************************************************************
COL IDRTSDGKGRIADYTLSQLKSFDFGSYKDVAFKGERIPTLDEVLSLCLKYDKKLLIELKS
N315 IDRTSDGKGRIADYTLSQLKSFDFGSYKDVAFKGERIPTLDEVLSLCLKYDKKLLIELKS
NCTC8325 IDRTSDGKGRIADYTLSQLKSFDFGSYKDVAFKGERIPTLDEVLSLCLKYDKKLLIELKS
Newman IDRTSDGKGRIADYTLSQLKSFDFGSYKDVAFKGERIPTLDEVLSLCLKYDKKLLIELKS
USA300_FPR3757 IDRTSDGKGRIADYTLSQLKSFDFGSYKDVAFKGERIPTLDEVLSLCLKYDKKLLIELKS
************************************************************
COL PNLYPEIECKLLAFLEEKKVDATQVVIQSFDIECIEKLNTLGSIYELGVLCSKRNYWYKK
N315 PNLYPEIECKLLAFLEEKKVDATQVVIQSFDIECIEKLNTLGSIYELGVLSSKRNYWYKK
NCTC8325 PNLYPEIECKLLAFLEEKKVDATQVVIQSFDIECIEKLNTLGSIYELGVLCSKRNYWYKK
Newman PNLYPEIECKLLAFLEEKKVDATQVVIQSFDIECIEKLNTLGSIYELGVLCSKRNYWYKK
USA300_FPR3757 PNLYPEIECKLLAFLEEKKVDATQVVIQSFDIECIEKLNTLGSIYELGVLCSKRNYWYKK
**************************************************.*********
COL PNFSRIAQIASYVNPNYALVTRKFVDKAHHHQLQVMPYTVNKLKTGEKLRQMGVDGLITD
N315 PNFSRIAQIASYVNPNYALVARKFVDKAHHHQLQVMPYTVNKLKTGEKLRQMGVDGLITD
NCTC8325 PNFSRIAQIASYVNPNYALVTRKFVDKAHHHQLQVMPYTVNKLKTGEKLRQMGVDGLITD
Newman PNFSRIAQIASYVNPNYALVTRKFVDKAHHHQLQVMPYTVNKLKTGEKLRQMGVDGLITD
USA300_FPR3757 PNFSRIAQIASYVNPNYALVTRKFVDKAHHHQLQVMPYTVNKLKTGEKLRQMGVDGLITD
********************:***************************************
COL NPKLFIK
N315 NPKLFIK
NCTC8325 NPKLFIK
Newman NPKLFIK
USA300_FPR3757 NPKLFIK
*******