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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004390000
- symbol?: sgtA
- synonym:
- description?: transglycosylase
- transglycosylase
- transglycosylase domain-containing protein
- glycosyl transferase family protein
- penicillin-binding protein
- transglycosylase, putative
- Glycosyl transferase, family 51
- membrane carboxypeptidase
- Multimodular transpeptidase-transglycosylase
- penicillin-binding protein 1A
- pseudogene
- putative transglycosylase
- transglycosylase domain protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4628904..4629809
- synteny block?: BlockID0033940
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1688 (sgtA)
08BA02176:
C248_1772
11819-97:
MS7_1736
6850:
RSAU_001586
71193:
ST398NM01_1782
ECT-R 2:
ECTR2_1570
ED133:
SAOV_1716
ED98:
SAAV_1740
HO 5096 0412:
SAEMRSA15_16380
JH1:
SaurJH1_1820
JH9:
SaurJH9_1785
JKD6008:
SAA6008_01700 (mrcB)
JKD6159:
SAA6159_01653 (mrcB)
LGA251:
SARLGA251_16200
M013:
M013TW_1744
MRSA252:
SAR1807
MSHR1132:
SAMSHR1132_15800
MSSA476:
SAS1656
Mu3:
SAHV_1716 (sgtA)
Mu50:
SAV1730 (sgtA)
MW2:
MW1672 (sgtA)
RF122:
SAB1588
ST398:
SAPIG1782
T0131:
SAT0131_01833
TCH60:
HMPREF0772_11423
TW20:
SATW20_17200
USA300_TCH1516:
USA300HOU_1718 (sgtA)
VC40:
SAVC_07855
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNQDNNHQLNHRIYHFEKIYKAIKHVIVFIFMIFIAIVAIAVIAMSLYFHHLTKTSDSL
N315 MTNQDNNHQLNHRIYHFEKIYKAIKHVIVFIFMIFIAIVAIAVIAMSLYFHHLTKTSDSL
NCTC8325 MTNQDNNHQLNHRIYHFEKIYKAIKHVIVFIFMIFIAIVAIAVIAMSLYFHHLTKTSDSL
Newman MTNQDNNHQLNHRIYHFEKIYKAIKHVIVFIFMIFIAIVAIAVIAMSLYFHHLTKTSDSL
USA300_FPR3757 MTNQDNNHQLNHRIYHFEKIYKAIKHVIVFIFMIFIAIVAIAVIAMSLYFHHLTKTSDSL
************************************************************
COL SDDALIKKVRQIPGDELLDHNNKNLLYEYNHSQNSLIIGPKTSSPNVIKALTSSEDTLFY
N315 SDDALIKKVRQIPGDELLDHNNKNLLYEYNHSQNSLIIGPKTSSPNVIKALTSSEDTLFY
NCTC8325 SDDALIKKVRQIPGDELLDHNNKNLLYEYNHSQNSLIIGPKTSSPNVIKALTSSEDTLFY
Newman SDDALIKKVRQIPGDELLDHNNKNLLYEYNHSQNSLIIGPKTSSPNVIKALTSSEDTLFY
USA300_FPR3757 SDDALIKKVRQIPGDELLDHNNKNLLYEYNHSQNSLIIGPKTSSPNVIKALTSSEDTLFY
************************************************************
COL KHDGILPKAILRAMIQDIFNTDQSSGGSTITQQLVKNQVLTNEKTYSRKANELRLAIRLE
N315 KHDGILPKAILRAMIQDIFNTDQSSGGSTITQQLVKNQVLTNEKTYSRKANELRLAIRLE
NCTC8325 KHDGILPKAILRAMIQDIFNTDQSSGGSTITQQLVKNQVLTNEKTYSRKANELRLAIRLE
Newman KHDGILPKAILRAMIQDIFNTDQSSGGSTITQQLVKNQVLTNEKTYSRKANELRLAIRLE
USA300_FPR3757 KHDGILPKAILRAMIQDIFNTDQSSGGSTITQQLVKNQVLTNEKTYSRKANELRLAIRLE
************************************************************
COL HLLSKDEIIYTYLNIVPFGKDYNGANISGIASASYSLFGIPPKDLSIAQSAYLIGLLQSP
N315 HLLSKDEIIYTYLNIVPFGRDYNGANISGIASASYSLFGIPPKDLSIAQSAYLIGLLQSP
NCTC8325 HLLSKDEIIYTYLNIVPFGRDYNGANISGIASASYSLFGIPPKDLSIAQSAYLIGLLQSP
Newman HLLSKDEIIYTYLNIVPFGRDYNGANISGIASASYSLFGIPPKDLSIAQSAYLIGLLQSP
USA300_FPR3757 HLLSKDEIIYTYLNIVPFGRDYNGANISGIASASYSLFGIPPKDLSIAQSAYLIGLLQSP
*******************:****************************************
COL YGYTPYEKDGTLKSDKDLKYSIQRQHYVLKRMLIEDQITEKEYNDALKYDIKSHLLNRKK
N315 YGYTPYEKDGTLKSDKDLKYSIQRQHYVLKRMLIEDQITEKEYNDALKYDIKSHLLNRKK
NCTC8325 YGYTPYEKDGTLKSDKDLKYSIQRQHYVLKRMLIEDQITEKEYNDALKYDIKSHLLNRKK
Newman YGYTPYEKDGTLKSDKDLKYSIQRQHYVLKRMLIEDQITEKEYNDALKYDIKSHLLNRKK
USA300_FPR3757 YGYTPYEKDGTLKSDKDLKYSIQRQHYVLKRMLIEDQITEKEYNDALKYDIKSHLLNRKK
************************************************************
COL R
N315 R
NCTC8325 R
Newman R
USA300_FPR3757 R
*