PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004843000
• symbol^?: bcp
• synonym:
• description^?: peroxiredoxin

  descriptions from strain specific annotations:

  • peroxiredoxin
  • bacterioferritin comigratory protein
  • ahpC/TSA family protein
  • alkyl hydroperoxide reductase
  • Thiol peroxidase, Bcp-type
  • Thioredoxin peroxidase
• strand^?: -
• coordinates^?: 5050605..5051057
• synteny block^?: BlockID0037730
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1921 (bcp)
N315:
SA1680
NCTC8325:
SAOUHSC_01999
Newman:
NWMN_1755
USA300_FPR3757:
SAUSA300_1844
04-02981:
SA2981_1819
08BA02176:
C248_1934
11819-97:
MS7_1898
6850:
RSAU_001750 (bcp)
71193:
ST398NM01_1956
ECT-R 2:
ECTR2_1734
ED133:
SAOV_1890
ED98:
SAAV_1913 (bcp)
HO 5096 0412:
SAEMRSA15_17700
JH1:
SaurJH1_1951
JH9:
SaurJH9_1917
JKD6008:
SAA6008_01820 (bcp)
JKD6159:
SAA6159_01794 (bcp)
LGA251:
SARLGA251_17450
M013:
M013TW_1897
MRSA252:
SAR1953
MSHR1132:
SAMSHR1132_17080
MSSA476:
SAS1785
Mu3:
SAHV_1848
Mu50:
SAV1863
MW2:
MW1803
RF122:
SAB1796c
ST398:
SAPIG1956
T0131:
SAT0131_01985
TCH60:
HMPREF0772_11281 (bcp)
TW20:
SATW20_18570
USA300_TCH1516:
USA300HOU_1858 (bcp)
VC40:
SAVC_08570

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFND
  N315            MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFND
  NCTC8325        MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFND
  Newman          MLQKGEQFPIFKLENQDGTVITNDILKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFND
  USA300_FPR3757  MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIIYFYPRDNTPTCTTEACDFRDNLEMFND
                  ************************ ***********************************
  
  COL             LDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRT
  N315            LDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRT
  NCTC8325        LDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRT
  Newman          LDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRT
  USA300_FPR3757  LDVAVYGISGDSKKKHQNFIEKHGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRT
                  ************************************************************
  
  COL             TFIIDEQGKVLDVIEKVKVKTQIEELKNILG
  N315            TFIIDEQGKVLDVIEKVKVKTQIEELKNILG
  NCTC8325        TFIIDEQGKVLDVIEKVKVKTQIEELKNILG
  Newman          TFIIDEQGKVLDVIEKVKVKTQIEELKNILG
  USA300_FPR3757  TFIIDEQGKVLDVIEKVKVKTQIEELKNILG
                  *******************************