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Summary[edit | edit source]

  • pan ID?: SAUPAN005119000
  • symbol?:
  • synonym:
  • description?: oxidoreductase

      descriptions from strain specific annotations:

    • oxidoreductase
    • anti repressor
    • phage anti repressor
    • phi77 ORF014-like protein, phage anti-repressor protein
    • phage antirepressor protein
    • bacteriophage antirepressor
    • phage antirepressor family protein
    • pseudogene
    • putative anti repressor
  • strand?: -
  • coordinates?: 5260544..5262389
  • synteny block?: BlockID0039720
  • occurrence?: in 58% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1955
    08BA02176:
    11819-97:
    6850:
    71193:
    ST398NM01_2954
    ECT-R 2:
    ECTR2_1865
    ED133:
    ED98:
    HO 5096 0412:
    SAEMRSA15_19160
    JH1:
    SaurJH1_2087
    JH9:
    SaurJH9_2050
    JKD6008:
    SAA6008_02047
    JKD6159:
    SAA6159_01928
    LGA251:
    M013:
    MRSA252:
    SAR2096
    MSHR1132:
    MSSA476:
    SAS1914
    Mu3:
    SAHV_1980
    Mu50:
    SAV1994
    MW2:
    MW1932
    RF122:
    ST398:
    T0131:
    SAT0131_02128
    TCH60:
    TW20:
    SATW20_19910
    USA300_TCH1516:
    USA300HOU_2000
    VC40:

Genome Viewer[edit | edit source]

N315
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    N315            MQALQTKSNIGEMFNIQEKENGEIAISGRELHQALEVKTPYKKWFERMSDYGFEENIDYI
    Newman          MQALQTKSNIGEMFNIQEKENGEIAISGRELHQALEVKTPYKKWFERMSDYGFEENIDYI
    USA300_FPR3757  MQALQTNSNIGEMFNIQEKENGEIAISGRELHQALEVKTAYKDWFPRMLKYGFEENTDYT
                    ******:********************************.**.** ** .****** ** 

    N315            VTDIFVHNPLGGRQNQTDHALTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMQ
    Newman          VTDIFVHNPLGGRQNQTDHALTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMQ
    USA300_FPR3757  AIAQKRATAQGNMTHYIDHALTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMQ
                    .      .. *.  :  *******************************************

    N315            RALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGINIGQRRLFE
    Newman          RALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGINIGQRRLFE
    USA300_FPR3757  RALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGVNIGQRRLFE
                    **************************************************:*********

    N315            WLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFV
    Newman          WLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFV
    USA300_FPR3757  WLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFV
                    ************************************************************

    N315            NKFLGEKQTS
    Newman          NKFLGEKQTS
    USA300_FPR3757  NKFLGEKQTS
                    **********