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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005190000
- symbol?: lukG
- synonym: lukB
- description?: gamma-hemolysin subunit B
- gamma-hemolysin subunit B
- bi-component leukocidin LukGH subunit G
- leukocidin/hemolysin toxin family protein
- leukocidin/hemolysin toxin subunit F
- leukocidin F subunit LuKF-G, putative
- leukocidin subunit precursor
- leukocidin F subunit
- beta-channel forming cytolysin
- beta-channel forming cytolysin family protein
- gamma-hemolysin component B
- leukocidin-like protein 1
- Leukocidin LukF-PV
- leukocidin subunit precursor, putative
- putative leukocidin F subunit
- synergohymenotropic toxin
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5359637..5360512
- synteny block?: BlockID0040220
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1966
08BA02176:
C248_2027
11819-97:
MS7_2036
6850:
RSAU_001837 (lukG)
71193:
ST398NM01_2060
ECT-R 2:
ECTR2_1876
ED133:
SAOV_2041
ED98:
SAAV_2072
HO 5096 0412:
SAEMRSA15_19270
JH1:
SaurJH1_2099
JH9:
SaurJH9_2062
JKD6008:
SAA6008_02058
JKD6159:
SAA6159_01939
LGA251:
SARLGA251_18230
M013:
M013TW_1976
MRSA252:
SAR2107
MSHR1132:
SAMSHR1132_18470
MSSA476:
SAS1924
Mu3:
SAHV_1990
Mu50:
SAV2004
MW2:
MW1941
RF122:
SAB1875c
ST398:
SAPIG2060
T0131:
SAT0131_02140
TCH60:
HMPREF0772_11178
TW20:
SATW20_20010
USA300_TCH1516:
USA300HOU_2011
VC40:
SAVC_08965
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ------------------------------------------------MYTRTATTSDSQ
N315 MIKQLYKNITICSLAISTALTVFPATSYAKINSEIKAVSEKNLDGDTKMYTRTATTSDSQ
NCTC8325 MIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLDGDTKMYTRTATTSDSQ
Newman MIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLDGDTKMYTRTATTSDSQ
USA300_FPR3757 MIKQLCKNITICTLALSTTFTVLPATSFAKINSEIKQVSEKNLDGDTKMYTRTATTSDSQ
************
COL KNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNV
N315 KNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNV
NCTC8325 KNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNV
Newman KNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNV
USA300_FPR3757 KNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNV
************************************************************
COL DDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQP
N315 DDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQP
NCTC8325 DDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQP
Newman DDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQP
USA300_FPR3757 DDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQP
************************************************************
COL SYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
N315 SYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
NCTC8325 SYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
Newman SYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
USA300_FPR3757 SYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKD
************************************************************
COL NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYW
N315 NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYW
NCTC8325 NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYW
Newman NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYW
USA300_FPR3757 NFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFKIDWNRHGFWGYW
************************************************************
COL SGENHVDKKEEKLSALYEVDWKTHNVKFVKVLNDNEKK
N315 SGENHVDKKEEKLSALYEVDWKTHDVKFVKVLNDNEKK
NCTC8325 SGENHVDKKEEKLSALYEVDWKTHNVKFVKVLNDNEKK
Newman SGENHVDKKEEKLSALYEVDWKTHNVKFVKVLNDNEKK
USA300_FPR3757 SGENHVDKKEEKLSALYEVDWKTHNVKFVKVLNDNEKK
************************:*************