PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005203000
• symbol^?: fhuD1
• synonym:
• description^?: ferrichrome-binding protein FhuD

  descriptions from strain specific annotations:

  • ferrichrome-binding protein FhuD
  • iron compound ABC transporter iron compound-binding protein
  • ferric hydroxamate receptor
  • ferrichrome ABC superfamily ATP binding cassette transporter, binding protein
  • ferrichrome ABC transporter
  • ferrichrome-binding protein precursor
  • ferric hydroxamate receptor 1
  • Iron compound ABC transporter, iron compound-binding protein
  • putative ferrichrome-binding protein precursor
• strand^?: -
• coordinates^?: 5367331..5369276
• synteny block^?: BlockID0040340
• occurrence^?: in 36% of 33 strains

⊟Orthologs

COL:
SACOL2010
N315:
—
NCTC8325:
SAOUHSC_02246
Newman:
NWMN_1931
USA300_FPR3757:
SAUSA300_1978
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_19310 (fhuD1)
JH1:
—
JH9:
—
JKD6008:
SAA6008_02062
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS1928
Mu3:
—
Mu50:
—
MW2:
MW1945
RF122:
—
ST398:
—
T0131:
SAT0131_02146
TCH60:
—
TW20:
SATW20_20060
USA300_TCH1516:
USA300HOU_2017
VC40:
SAVC_08985

⊟Genome Viewer

COL
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKRLIGILLCNLFILTACSASVDKTSNSTKTTDYKIENGETLKVPEKPKRVAVLTGFYVG
  NCTC8325        MKRLIGILLCNLFILTACSASVDKTSNSTKTTDYKIENGETLKVPEKPKRVAVLTGFYVG
  Newman          MKRLIGILLCNLFILTACSASVDKTSNSTKTTDYKIENGETLKVPEKPKRVAVLTGFYVG
  USA300_FPR3757  MKRLIGILLCNLFILTACSASVDKTSNSTKTTDYKIENGETLKVPEKPKRVAVLTGFYVG
                  ************************************************************
  
  COL             DFIKLGIKPIAVSDITKDSSILKPYLKGVDYIGENDVERVAKAKPDLIVVDAMDKNIKKY
  NCTC8325        DFIKLGIKPIAVSDITKDSSILKPYLKGVDYIGENDVERVAKAKPDLIVVDAMDKNIKKY
  Newman          DFIKLGIKPIAVSDITKDSSILKPYLKGVDYIGENDVERVAKAKPDLIVVDAMDKNIKKY
  USA300_FPR3757  DFIKLGIKPIAVSDITKDSSILKPYLKGVDYIGENDVERVAKAKPDLIVVDAMDKNIKKY
                  ************************************************************
  
  COL             QKIAPTIPYTYNKYNHKEILKEIGKLTNNEDKAKKWIEEWDDKTRKDKKEIQSKIGQATA
  NCTC8325        QKIAPTIPYTYNKYNHKEILKEIGKLTNNEDKAKKWIEEWDDKTRKDKKEIQSKIGQATA
  Newman          QKIAPTIPYTYNKYNHKEILKEIGKLTNNEDKAKKWIEEWDDKTRKDKKEIQSKIGQATA
  USA300_FPR3757  QKIAPTIPYTYNKYNHKEILKEIGKLTNNEDKAKKWIEEWDDKTRKDKKEIQSKIGQATA
                  ************************************************************
  
  COL             SVFEPDEKQIYIYNSTWGRGLDIVHDAFGMPMTKQYKDKLQEDKKGYASISKENISKYAG
  NCTC8325        SVFEPDEKQIYIYNSTWGRGLDIVHDAFGMPMTKQYKDKLQEDKKGYASISKENISKYAG
  Newman          SVFEPDEKQIYIYNSTWGRGLDIVHDAFGMPMTKQYKDKLQEDKKGYASISKENISKYAG
  USA300_FPR3757  SVFEPDEKQIYIYNSTWGRGLDIVHDAFGMPMTKQYKDKLQEDKKGYASISKENISKYAG
                  ************************************************************
  
  COL             DYIFLSKPSYGKFDFEKTHTWQNIEAVKKGHVISYKAEDYWFTDPITLEHLRSKLKKEIL
  NCTC8325        DYIFLSKPSYGKFDFEKTHTWQNIEAVKKGHVISYKAEDYWFTDPITLEHLRSKLKKEIL
  Newman          DYIFLSKPSYGKFDFEKTHTWQNIEAVKKGHVISYKAEDYWFTDPITLEHLRSKLKKEIL
  USA300_FPR3757  DYIFLSKPSYGKFDFEKTHTWQNIEAVKKGHVISYKAEDYWFTDPITLEHLRSKLKKEIL
                  ************************************************************
  
  COL             NKK
  NCTC8325        NKK
  Newman          NKK
  USA300_FPR3757  NKK
                  ***