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Summary[edit | edit source]

  • pan ID?: SAUPAN005584000
  • symbol?:
  • synonym:
  • description?: alpha/beta hydrolase

      descriptions from strain specific annotations:

    • alpha/beta hydrolase
    • extracellular lipase/esterase, putative
    • alpha/beta cell surface hydrolase
    • Cell surface hydrolase
    • cell surface hydrolase (putative)
    • putative cell surface hydrolase
  • strand?: -
  • coordinates?: 5724485..5725354
  • synteny block?: BlockID0043440
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2126
    08BA02176:
    C248_2226
    11819-97:
    MS7_2211
    6850:
    RSAU_002032
    71193:
    ST398NM01_2248
    ECT-R 2:
    ECTR2_2049
    ED133:
    SAOV_2235c
    ED98:
    SAAV_2249
    HO 5096 0412:
    SAEMRSA15_20930
    JH1:
    SaurJH1_2258
    JH9:
    SaurJH9_2219
    JKD6008:
    SAA6008_02229
    JKD6159:
    SAA6159_02099
    LGA251:
    SARLGA251_19830
    M013:
    M013TW_2154
    MRSA252:
    SAR2279
    MSHR1132:
    SAMSHR1132_20200
    MSSA476:
    SAS2089
    Mu3:
    SAHV_2172
    Mu50:
    SAV2188
    MW2:
    MW2114
    RF122:
    SAB2069c
    ST398:
    SAPIG2248
    T0131:
    SAT0131_02362
    TCH60:
    HMPREF0772_11003
    TW20:
    SATW20_23260
    USA300_TCH1516:
    USA300HOU_2181
    VC40:
    SAVC_09830

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             -----MKKIFVIITTLLAVAIIIGSIIMVVFSQRQAQTFKIQQQQFVKKPIPTLFLHGFG
    N315            -----MKKIFVIITTLLAVAIIIGSIITVVFSQRQAQTFKIQQQQFVKKPIPTLFLHGFG
    NCTC8325        MGVKSVKKIFVIITTLLAVAIIIGSIIMVVFSQRQAQTFKIQQQQFVKKPIPTLFLHGFG
    Newman          MGVKSVKKIFVIITTLLAVAIIIGSIIMVVFSQRQAQTFKIQQQQFVKKPIPTLFLHGFG
    USA300_FPR3757  -----MKKIFVIITTLLAVAIIIGSIIMVVFSQRQAQTFKIQQQQFVKKPIPTLFLHGFG
                         :********************* ********************************

    COL             GSANSEKFMVKQAEKRGVTKDIITAYVSKDGAVTFKGKLRKDAVNPIVKIELENNRQGYL
    N315            GSANSEKFMVKQAEKRGVTKDIITAYVSKDGAVTFKGKLRKDAVNPIVKIELENNRQGYL
    NCTC8325        GSANSEKFMVKQAEKRGVTKDIITAYVSKDGAVTFKGKLRKDAVNPIVKIELENNRQGYL
    Newman          GSANSEKFMVKQAEKRGVTKDIITAYVSKDGAVTFKGKLRKDAVNPIVKIELENNRQGYL
    USA300_FPR3757  GSANSEKFMVKQAEKRGVTKDIITAYVSKDGAVTFKGKLRKDAVNPIVKIELENNRQGYL
                    ************************************************************

    COL             DKNAAWFKNVLTKLQSEYNFDKFNFVGHSMGNLTFAQYMMTYGNDKSLPQLNKQVNIAGT
    N315            DKNAAWFKNVLTKLQSEYNFDKFNFVGHSMGNLTFAQYMMTYGNDKSLPQLNKQVNIAGT
    NCTC8325        DKNAAWFKNVLTKLQSEYNFDKFNFVGHSMGNLTFAQYMMTYGNDKSLPQLNKQVNIAGT
    Newman          DKNAAWFKNVLTKLQSEYNFDKFNFVGHSMGNLTFAQYMMTYGNDKSLPQLNKQVNIAGT
    USA300_FPR3757  DKNAAWFKNVLTKLQSEYNFDKFNFVGHSMGNLTFAQYMMTYGNDKSLPQLNKQVNIAGT
                    ************************************************************

    COL             FNGVLNMNEDVNEITVDKDGKPSRMNQPYQQLRVLKDIYKGKGIEVLNIYGDLKDGTHSD
    N315            FNGVLNMNEDVNEITVDKDGKPSRMNQPYQQLRVLKDIYKGKGIEVLNIYGDLKDGTHSD
    NCTC8325        FNGVLNMNEDVNEITVDKDGKPSRMNQPYQQLRVLKDIYKGKGIEVLNIYGDLKDGTHSD
    Newman          FNGVLNMNEDVNEITVDKDGKPSRMNQPYQQLRVLKDIYKGKGIEVLNIYGDLKDGTHSD
    USA300_FPR3757  FNGVLNMNEDVNEITVDKDGKPSRMNQPYQQLRVLKDIYKGKGIEVLNIYGDLKDGTHSD
                    ************************************************************

    COL             GRVSNSSSKSLKYLLGNSPKSYRESKYEGEPAQHSQLHENENFANELIDFLWKK
    N315            GRVSNSSSKSLKYLLGNSPKSYRESKYEGEPAQHSQLHENENVANELIDFLWKK
    NCTC8325        GRVSNSSSKSLKYLLGNSPKSYRESKYEGEPAQHSQLHENENVANELIDFLWKK
    Newman          GRVSNSSSKSLKYLLGNSPKSYRESKYEGEPAQHSQLHENENVANELIDFLWKK
    USA300_FPR3757  GRVSNSSSKSLKYLLGNSPKSYRESKYEGEPAQHSQLHENENVANELIDFLWKK
                    ******************************************.***********