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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005805000
- symbol?: glvR
- synonym:
- description?: MurR/RpiR family transcriptional regulator
- MurR/RpiR family transcriptional regulator
- phosphosugar-binding transcriptional regulator
- hex regulon repressor
- phosphosugar-binding transcriptional regulator, putative
- helix-turn-helix domain, rpiR family protein
- putative transcriptional regulator
- RpiR family regulatory protein
- RpiR family transcriptional regulator
- sugar isomerase (SIS)
- transcriptional regulator
- Transcriptional regulator, RpiR family
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5892476..5893246
- synteny block?: BlockID0045500
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2263
08BA02176:
C248_2366
11819-97:
MS7_2341
6850:
RSAU_002160
71193:
ST398NM01_2375
ECT-R 2:
ECTR2_2183
ED133:
SAOV_2364
ED98:
SAAV_2386
HO 5096 0412:
SAEMRSA15_22220
JH1:
SaurJH1_2392
JH9:
SaurJH9_2349
JKD6008:
SAA6008_02360
JKD6159:
SAA6159_02228
LGA251:
SARLGA251_21070
M013:
M013TW_2281
MRSA252:
SAR2409
MSHR1132:
SAMSHR1132_21490
MSSA476:
SAS2217
Mu3:
SAHV_2308
Mu50:
SAV2324
MW2:
MW2245
RF122:
SAB2201
ST398:
SAPIG2375
T0131:
SAT0131_02507 (nrdD)
TCH60:
HMPREF0772_10871
TW20:
SATW20_24560
USA300_TCH1516:
USA300HOU_2304
VC40:
SAVC_10485
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF
N315 MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF
NCTC8325 MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF
Newman MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF
USA300_FPR3757 MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF
************************************************************
COL DGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERVDYQLLTKKMHTASTIYLY
N315 DGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERVDYQLLTEKMHTASTIYLY
NCTC8325 DGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERVDYQLLTKKMHTASTIYLY
Newman DGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERVDYQLLTKKMHTASTIYLY
USA300_FPR3757 DGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERVDYQLLTKKMHTASTIYLY
************************************************:***********
COL GTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEPNDLFFIISLSGETHELLE
N315 GTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEPNDLFFIISLSGETHELLE
NCTC8325 GTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEPNDLFFIISLSGETHELLE
Newman GTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEPNDLFFIISLSGETHELLE
USA300_FPR3757 GTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEPNDLFFIISLSGETHELLE
************************************************************
COL VTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
N315 VTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
NCTC8325 VTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
Newman VTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
USA300_FPR3757 VTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
************************************************************
COL RKYNEYLLHNDISN
N315 RKYNEYLLHNDISN
NCTC8325 RKYNEYLLHNDISN
Newman RKYNEYLLHNDISN
USA300_FPR3757 RKYNEYLLHNDISN
**************