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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005984000
- symbol?: —
- synonym:
- description?: putative lipoprotein
- strand?: +
- coordinates?: 6044856..6045566
- synteny block?: BlockID0047280
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2373
08BA02176:
C248_2485
11819-97:
MS7_2450
6850:
RSAU_002276
71193:
ST398NM01_2488
ECT-R 2:
ECTR2_2294
ED133:
SAOV_2486
ED98:
SAAV_2502
HO 5096 0412:
SAEMRSA15_23360
JH1:
SaurJH1_2511
JH9:
SaurJH9_2462
JKD6008:
SAA6008_02477
JKD6159:
SAA6159_02334
LGA251:
SARLGA251_22170
M013:
M013TW_2399
MRSA252:
SAR2526
MSHR1132:
SAMSHR1132_22640
MSSA476:
SAS2328
Mu3:
SAHV_2420
Mu50:
SAV2436
MW2:
MW2360
RF122:
SAB2318
ST398:
SAPIG2488
T0131:
SAT0131_02633
TCH60:
HMPREF0772_10752
TW20:
SATW20_25650
USA300_TCH1516:
USA300HOU_2422
VC40:
SAVC_11055
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNRKILPVKPISQLFPIPMVMGCEGVSAAMMLQYNNQHIPATEIMRHWPTHPNNPHKGYV
N315 MNRKILPVKPISQLFPIPMVMGCEGVSAAMMLQYNNQHIPATEIMRHWPTHPNNPHKGYV
NCTC8325 -----------------------------MMLQYNNQHIPATEIMRHWPTHPNNPHKGYV
Newman MNRKILPVKPISQLFPIPMVMGCEGVSAAMMLQYNNQHIPATEIMRHWPTHPNNPHKGYV
USA300_FPR3757 -----------------------------MMLQYNNQHIPATEIMRHWPTHPNNPHKGYV
*******************************
COL GHHLFIKLGNYHQTIFPEAYVPFLQKYNPNIVDGTGKSLEDLKGIIDQGQPVLIYHTNLG
N315 GHHLFIKLGNYHQTIFPEAYVPFLQKYNPNIVDGTGKSLEDLKGIIDQGQPVLIYHTNLG
NCTC8325 GHHLFIKLGNYHQTIFPEAYVPFLQKYNPNIVDGTGKSLEDLKGIIDQGQPVLIYHTNLG
Newman GHHLFIKLGNYHQTIFPEAYVPFLQKYNPNIVDGTGKSLEDLKGIIDQGQPVLIYHTNLG
USA300_FPR3757 GHHLFIKLGNYHQTIFPEAYVPFLQKYNPNIVDGTGKSLEDLKGIIDQGQPVLIYHTNLG
************************************************************
COL SKPLLRVFRFDNKPAKQVSNIHVTLLIGYDDYYYYYIDPLWSHIRRGLVLPAIIPNRKQI
N315 SKPLLRVFRFDNKPAKQVSNIHVTLLIGYDDYYYYYIDPLWSHIRRGLVLPAIIPNRKQI
NCTC8325 SKPLLRVFRFDNKPAKQVSNIHVTLLIGYDDYYYYYIDPLWSHIRRGLVLPAIIPNRKQI
Newman SKPLLRVFRFDNKPAKQVSNIHVTLLIGYDDYYYYYIDPLWSHIRRGLVLPAIIPNRKQI
USA300_FPR3757 SKPLLRVFRFDNKPAKQVSNIHVTLLIGYDDYYYYYIDPLWSHIRRGLVLPAIIPNRKQI
************************************************************
COL IKIRKEKMEYSFNSPGRKCIYVQPHSYTIENQQQNKHT
N315 IKIRKEKMEYSFNSPGRKCIYVQPHSYTIENQQQNKHT
NCTC8325 IKIRKEKMEYSFNSPGRKCIYVQPHSYTIENQQQNKHT
Newman IKIRKEKMEYSFNSPGRKCIYVQPHSYTIENQQQNKHT
USA300_FPR3757 IKIRKEKMEYSFNSPGRKCIYVQPHSYTIENQQQNKHT
**************************************