PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006292000
• symbol^?: panC
• synonym:
• description^?: pantoate--beta-alanine ligase

  descriptions from strain specific annotations:

  • pantoate--beta-alanine ligase
  • pantoate--beta-alanine ligase PanC
  • pantothenate synthetase
  • putative pantoate--beta-alanine ligase
• strand^?: -
• coordinates^?: 6340553..6341404
• synteny block^?: BlockID0050080
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2614 (panC)
N315:
SA2391 (panC)
NCTC8325:
SAOUHSC_02918 (panC)
Newman:
NWMN_2495 (panC)
USA300_FPR3757:
SAUSA300_2533 (panC)
04-02981:
SA2981_2536 (panC)
08BA02176:
C248_2657 (panC)
11819-97:
MS7_2603 (panC)
6850:
RSAU_002439 (panC)
71193:
ST398NM01_2646
ECT-R 2:
ECTR2_2452 (panC)
ED133:
SAOV_2642c
ED98:
SAAV_2664 (panC)
HO 5096 0412:
SAEMRSA15_25010 (panC)
JH1:
SaurJH1_2674 (panC)
JH9:
SaurJH9_2620 (panC)
JKD6008:
SAA6008_02655 (panC)
JKD6159:
SAA6159_02494 (panC)
LGA251:
SARLGA251_23710 (panC)
M013:
M013TW_2575
MRSA252:
SAR2676 (panC)
MSHR1132:
SAMSHR1132_24130
MSSA476:
SAS2483 (panC)
Mu3:
SAHV_2582 (panC)
Mu50:
SAV2598 (panC)
MW2:
MW2517 (panC)
RF122:
SAB2471c (panC)
ST398:
SAPIG2646 (panC)
T0131:
SAT0131_02830 (sbcC)
TCH60:
HMPREF0772_10594 (panC)
TW20:
SATW20_27370 (panC)
USA300_TCH1516:
USA300HOU_2592 (panC)
VC40:
SAVC_11860 (panC)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MTKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNP
  N315            MTKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRESVSTNDITVVSVFVNP
  NCTC8325        MTKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNP
  Newman          MTKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNP
  USA300_FPR3757  MTKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNP
                  ****************************************************:*******
  
  COL             LQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPGELGIDVKVGPLADVLEGA
  N315            LQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDIYPGELGIDVKVGPLADVLEGA
  NCTC8325        LQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPGELGIDVKVGPLADVLEGA
  Newman          LQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPGELGIDVKVGPLADVLEGA
  USA300_FPR3757  LQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPGELGIDVKVGPLADVLEGA
                  **************************************:*********************
  
  COL             KRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGIDIVREA
  N315            KRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGIDIVREA
  NCTC8325        KRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGIDIVREA
  Newman          KRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGIDIVREA
  USA300_FPR3757  KRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGIDIVREA
                  ************************************************************
  
  COL             DGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGERQSKVIIDRVTEYLESHISGRI
  N315            DGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGERQSKVIIDRVTEYLESHISGRI
  NCTC8325        DGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGERQSKVIIDRVTEYLESHISERI
  Newman          DGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGERQSKVIIDRVTEYLESHISGRI
  USA300_FPR3757  DGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGERQSKVIIDRVTEYLESHISGRI
                  ********************************************************* **
  
  COL             EEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLIDNIIIGAE
  N315            EEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLIDNIIIGAE
  NCTC8325        EEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLIDNIIIGAE
  Newman          EEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLIDNIIIGAE
  USA300_FPR3757  EEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLIDNIIIGAE
                  *******************************************