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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006381000
- symbol?: gtfA
- synonym:
- description?: accessory Sec system glycosyltransferase GtfA
- accessory Sec system glycosyltransferase GtfA
- glycosyl transferase, group 1 family protein
- glycosyl transferase, putative
- putative glycosyl transferase
- glycosyltransferase
- Poly(glycerol-phosphate) alpha-glucosyltransferase GftA
- accessory Sec system glycosylation protein GtfA
- glycoside hydrolase family protein
- glycosyl transferases group 1 family protein
- lipopolysaccharide biosynthesis protein
- Poly(Glycerol-phosphate) alpha-glucosyltransferase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6423148..6424656
- synteny block?: BlockID0050890
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2587 (gftA)
08BA02176:
C248_2716
11819-97:
MS7_2653 (gtfA)
6850:
RSAU_002491
71193:
ST398NM01_2698
ECT-R 2:
ECTR2_2502
ED133:
SAOV_2699c
ED98:
SAAV_2718
HO 5096 0412:
SAEMRSA15_25530
JH1:
SaurJH1_2728
JH9:
SaurJH9_2672
JKD6008:
SAA6008_02707
JKD6159:
SAA6159_02544
LGA251:
SARLGA251_24200
M013:
M013TW_2629
MRSA252:
SAR2727
MSHR1132:
SAMSHR1132_24720
MSSA476:
SAS2534
Mu3:
SAHV_2632
Mu50:
SAV2648
MW2:
MW2569
RF122:
SAB2523c
ST398:
SAPIG2698
T0131:
SAT0131_02916
TCH60:
HMPREF0772_10539 (gtfA)
TW20:
SATW20_27860
USA300_TCH1516:
USA300HOU_2648
VC40:
SAVC_12120
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTIYNINFGIGWASSGVEYAQAYRAKLLRRTNQDTKFVFLDFIQSENIQTLTQNIGFKDQ
N315 MTIYNINFGIGWASSGVEYAQAYRAKLLRRTNQDTKFVFLDFIQSENIQTLTQNIGFKDQ
NCTC8325 MTIYNINFGIGWASSGVEYAQAYRAKLLRRTNQDTKFVFLDFIQSENIQTLTQNIGFKDQ
Newman MTIYNINFGIGWASSGVEYAQAYRAKLLRRTNQDTKFVFLDFIQSENIQTLTQNIGFKDQ
USA300_FPR3757 MTIYNINFGIGWASSGVEYAQAYRAKLLRRTNQDTKFVFLDFIQSENIQTLTQNIGFKDQ
************************************************************
COL EVIWLYQYFSDISLAPTTYTLDDIERELGHDISFRERNGKIVRLYFNGKSSFVTCYLQNE
N315 EVIWLYQYFSDISIAPTTYTLDDIERELGHEISFRERNGKIVRLYFNGKSSFVTCYLQNE
NCTC8325 EVIWLYQYFSDISLAPTTYTLDDIERELGHDISFRERNGKIVRLYFNGKSSFVTCYLQNE
Newman EVIWLYQYFSDISLAPTTYTLDDIERELGHDISFRERNGKIVRLYFNGKSSFVTCYLQNE
USA300_FPR3757 EVIWLYQYFSDISLAPTTYTLDDIERELGHDISFRERNGKIVRLYFNGKSSFVTCYLQNE
*************:****************:*****************************
COL QKDIVDRAEFVINSMLVRKDFYSYTRIFSEYYAPADNKAKLYMRQFYNQDGSIAYNEYID
N315 QKDVVDRAEFVINSMLVRKDFYSYTRIFSEYYAPADNKAKLYMRQFYNEDGSIAYNEYID
NCTC8325 QKDIVDRAEFVINSMLVRKDFYSYTRIFSEYYAPADNKAKLYMRQFYNQDGSIAYNEYID
Newman QKDIVDRAEFVINSMLVRKDFYSYTRIFSEYYAPADNKAKLYMRQFYNQDGSIAYNEYID
USA300_FPR3757 QKDIVDRAEFVINSMLVRKDFYSYTRIFSEYYAPADNKAKLYMRQFYNQDGSIAYNEYID
***:********************************************:***********
COL GDSSIYVFEDAVLYNKTEFIAYFLQRLNLTRDDIVILDRASDIGQAVLQHKGDSKVGVVI
N315 GDSSIYVFEDAVLYNKTEFIAYFLQRLNLTRDDIVILDRASDIGQAVLQHKGDSKVGVVI
NCTC8325 GDSSIYVFEDAVLYNKTEFIAYFLQRLNLTRDDIVILDRASDIGQAVLQHKGDSKVGVVI
Newman GDSSIYVFEDAVLYNKTEFIAYFLQRLNLTRDDIVILDRASDIGQAVLQHKGDSKVGVVI
USA300_FPR3757 GDSSIYVFEDAVLYNKTEFIAYFLQRLNLTRDDIVILDRASDIGQAVLQHKGDSKVGVVI
************************************************************
COL HADHYSNNMMSEQHILWNNYYEYQFSKAKYIDFFITATDIQNHMVCRQFEQYQGYRPRVY
N315 HADHYSNNMMSEQHILWNNYYEYQFSKAKYIDFFITATDIQNHMVCRQFEQYQGYRPRVY
NCTC8325 HADHYSNNMMSEQHILWNNYYEYQFSKAKYIDFFITATDIQNHMVCRQFEQYQGYRPRVY
Newman HADHYSNNMMSEQHILWNNYYEYQFSKAKYIDFFITATDIQNHMVCRQFEQYQGYRPRVY
USA300_FPR3757 HADHYSNNMMSEQHILWNNYYEYQFSKAKYIDFFITATDIQNHMVCRQFEQYQGYRPRVY
************************************************************
COL TIPVGSIDALSYPTLSRKPYAMISASRLANEKHIDWLVKAVIVAKRQVPELTFDIYGEGS
N315 TIPVGSIDALSYPKLSRKPYAMISASRLANEKHIDWLVKAVIVAKRQVPELTFDIYGEGS
NCTC8325 TIPVGSIDALSYPTLSRKPYAMISASRLANEKHIDWLVKAVIVAKRQVPELTFDIYGEGS
Newman TIPVGSIDALSYPTLSRKPYAMISASRLANEKHIDWLVKAVIVAKRQVPELTFDIYGEGS
USA300_FPR3757 TIPVGSIDALSYPTLSRKPYAMISASRLANEKHIDWLVKAVIVAKRQVPELTFDIYGEGS
*************.**********************************************
COL EKTRLRKIIDTHRAQDYIRLLGHVKLDEIYNDYELFLSASTSEGFGLTLMEAVGSGLGMI
N315 EKTRLRKIIDTHRAQDYIRLLGHVKLDEIYNDYELFLSASTSEGFGLTLMEAVGSGLGMI
NCTC8325 EKTRLRKIIDTHRAQDYIRLLGHVKLDEIYNDYELFLSASTSEGFGLTLMEAVGSGLGMI
Newman EKTRLRKIIDTHRAQDYIRLLGHVKLDEIYNDYELFLSASTSEGFGLTLMEAVGSGLGMI
USA300_FPR3757 EKTRLRKIIDTHRAQDYIRLLGHVKLDEIYNDYELFLSASTSEGFGLTLMEAVGSGLGMI
************************************************************
COL GLNVNYGNPTFIRDGENGYLVPFDTDEDSVDDVIAKLAHAIVMYFNNGPQTPHDISYEVA
N315 GLNVNYGNPTFIRDGENGYLVPFDTDEDSVDDVIAKLAHAIVMYFNNGPQAPHDISYEVA
NCTC8325 GLNVNYGNPTFIRDGENGYLVPFDTDEDSVDDVIAKLAHAIVMYFNNGPQTPHDISYEVA
Newman GLNVNYGNPTFIRDGENGYLVPFDTDEDSVDDVIAKLAHAIVMYFNNGPQTPHDISYEVA
USA300_FPR3757 GLNVNYGNPTFIRDGENGYLVPFDTDEDSVDDVIAKLAHAIVMYFNNGPQTPHDISYEVA
**************************************************:*********
COL QQFMTQDIILKWETLVQEVLHD
N315 QQFMTQDIILKWETLVQEVLHD
NCTC8325 QQFMTQDIILKWETLVQEVLHD
Newman QQFMTQDIILKWETLVQEVLHD
USA300_FPR3757 QQFMTQDIILKWETLVQEVLHD
**********************