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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006458000
- symbol?: —
- synonym:
- description?: DNA-binding protein
- DNA-binding protein
- DNA-binding protein, putative
- putative DNA-binding protein
- prolyl-tRNA synthetase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6503205..6503780
- synteny block?: BlockID0051650
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2636
08BA02176:
C248_2763
11819-97:
MS7_2702
6850:
RSAU_002542
71193:
ST398NM01_2743
ECT-R 2:
ECTR2_2549
ED133:
SAOV_2740
ED98:
SAAV_2769
HO 5096 0412:
SAEMRSA15_25960
JH1:
SaurJH1_2777
JH9:
SaurJH9_2720
JKD6008:
SAA6008_02754
JKD6159:
SAA6159_02591
LGA251:
SARLGA251_24630
M013:
M013TW_2679
MRSA252:
SAR2777
MSHR1132:
SAMSHR1132_25250
MSSA476:
SAS2581
Mu3:
SAHV_2681
Mu50:
SAV2697
MW2:
MW2616
RF122:
SAB2573
ST398:
SAPIG2743
T0131:
SAT0131_02974
TCH60:
HMPREF0772_10490
TW20:
SATW20_28320
USA300_TCH1516:
USA300HOU_2698
VC40:
SAVC_12355
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTLPKIGKPATRALNSQGIYTLEAVSQYTKSSLMEMHGVGPKAISILEQALFQHQLHFKT
N315 MTLPKIGKPATRALNSQGIYTLEAVSQYTKSSLMEMHGVGPKAISILEQALFQHQLHFKT
NCTC8325 MTLPKIGKPATRALNSQGIYTLEAVSQYTKSSLMEMHGVGPKAISILEQALFQHQLHFKT
Newman MTLPKIGKPATRALNSQGIYTLEAVSQYTKSSLMEMHGVGPKAISILEQALFQHQLHFKT
USA300_FPR3757 MTLPKIGKPATRALNSQGIYTLEAVSQYTKSSLMEMHGVGPKAISILEQALFQHQLHFKT
************************************************************
COL EVQSSLPFKLTGDVSCNHAPKRQQMIDFIVVTAALDIELLRSLVTTEFIWSVPGRFDIYG
N315 EVQSSLPFKLTGDVSCNHAPKRQQMIDFIVATAALDIELLRSLVTTEFIWSVPGHFDIYG
NCTC8325 EVQSSLPFKLTGDVSCNHAPKRQQMIDFIVVTAALDIELLRSLVTTEFIWSVPGRFDIYG
Newman EVQSSLPFKLTGDVSCNHAPKRQQMIDFIVVTAALDIELLRSLVTTEFIWSVPGRFDIYG
USA300_FPR3757 EVQSSLPFKLTGDVSCNHAPKRQQMIDFIVVTAALDIELLRSLVTTEFIWSVPGRFDIYG
******************************.***********************:*****
COL PQILIQELSNHYNQVASLNIHSSITHGCLGSMHGIEILKTGKEIHFAHFFEFENHKKDAK
N315 PQILIQELSNYYNQVASLNIHSNITHGCLGSMHGIEILKTGKEIHFAHFFEFENHKKDAK
NCTC8325 PQILIQELSNHYNQVASLNIHSSITHGCLGSMHGIEILKTGKEIHFAHFFEFENHKKDAK
Newman PQILIQELSNHYNQVASLNIHSSITHGCLGSMHGIEILKTGKEIHFAHFFEFENHKKDAK
USA300_FPR3757 PQILIQELSNHYNQVASLNIHSSITHGCLGSMHGIEILKTGKEIHFAHFFEFENHKKDAK
**********:***********.*************************************
COL LSKVTSYIVVG
N315 LSKVTSYIVVA
NCTC8325 LSKVTSYIVVG
Newman LSKVTSYIVVG
USA300_FPR3757 LSKVTSYIVVG
**********.