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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS03605 [old locus tag: SA0629 ]
  • pan locus tag?: SAUPAN002557000
  • symbol: SA_RS03605
  • pan gene symbol?:
  • synonym:
  • product: membrane protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS03605 [old locus tag: SA0629 ]
  • symbol: SA_RS03605
  • product: membrane protein
  • replicon: chromosome
  • strand: +
  • coordinates: 725548..726036
  • length: 489
  • essential: no DEG other strains

Accession numbers[edit | edit source]

  • Location: NC_002745 (725548..726036) NCBI
  • BioCyc: G1G21-710 BioCyc
  • MicrobesOnline: see SA0629

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGACAATTATTTTATGGCTACTTATCATCGCTGCCTTCATGTTAGCATTTGTTGGGTTG
    ATTAAGCCGATTATTCCTTCTGTTTTAGTATTATGGGTTGGCTTTCTAATCTATCAATTT
    GGCTTTCATAATCAGCATTTATCATGGGTGTTTTATGTATCTATGGCATTGCTAACAATA
    CTAATTTTATGTGCGGACTTTTTAGCTAATAAATATTTTGTGAATCGCTTCGGTGGTTCT
    AAGTTTGGAGAGTATGCAGCTTTAATTGGTGTGGTTATTGGATGTTTTGTTTTACCGCCA
    TTTGGAATTATTATTATACCTTTTATTTTGGTATTCATAGTTGAATTAATACAAGGCTAT
    TCATTTGAAAGAGCAGTTAAAGTAAGTATAGGTTCAATCGTAGCATTTTTAACAAGTAGT
    ATAGCTCAAGCAATCATTATGTTTATAATGATTGTATGGTTCTTTATAGATGCTTTATTG
    ATTAATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    489

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SA_RS03605 [old locus tag: SA0629 ]
  • symbol: SA_RS03605
  • description: membrane protein
  • length: 162
  • theoretical pI: 8.20836
  • theoretical MW: 18178.2
  • GRAVY: 1.57901

Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SA0629
  • PFAM:
    Glycine-zipper (CL0500) DUF456; Protein of unknown function (DUF456) (PF04306; HMM-score: 124.3)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 5
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.002699
    • TAT(Tat/SPI): 0.000213
    • LIPO(Sec/SPII): 0.065586
  • predicted transmembrane helices (TMHMM): 5

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MTIILWLLIIAAFMLAFVGLIKPIIPSVLVLWVGFLIYQFGFHNQHLSWVFYVSMALLTILILCADFLANKYFVNRFGGSKFGEYAALIGVVIGCFVLPPFGIIIIPFILVFIVELIQGYSFERAVKVSIGSIVAFLTSSIAQAIIMFIMIVWFFIDALLIN

Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]